Detailed information of evm.model.Ap9.157 in Astrangia poculata

Genomic Location: Ap9:1428147...1428730
NR annotation: XP_020630973.1, regulating synaptic membrane exocytosis protein 2-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JIS1Regulating synaptic membrane exocytosis protein 2 OS=Rattus norvegicus OX=10116 GN=Rims2 PE=1 SV=1
Q86UR5Regulating synaptic membrane exocytosis protein 1 OS=Homo sapiens OX=9606 GN=RIMS1 PE=1 SV=1
Q99NE5Regulating synaptic membrane exocytosis protein 1 OS=Mus musculus OX=10090 GN=Rims1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001484 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02318
all species →		FYVE_2FYVE-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR010911
all species →		DomainRab-binding domainInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR039032
all species →		FamilyRim-likeInterproscan
IPR041282
all species →		DomainFYVE-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12157
all species →		REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:0006887
all species →		Biological ProcessexocytosisInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0042391
all species →		Biological Processregulation of membrane potentialInterproscan
GO:0042734
all species →		Cellular Componentpresynaptic membraneInterproscan
GO:0044325
all species →		Molecular Functiontransmembrane transporter bindingInterproscan
GO:0048167
all species →		Biological Processregulation of synaptic plasticityInterproscan
GO:0048788
all species →		Cellular Componentcytoskeleton of presynaptic active zoneInterproscan
GO:0048791
all species →		Biological Processcalcium ion-regulated exocytosis of neurotransmitterInterproscan
GO:0050806
all species →		Biological Processpositive regulation of synaptic transmissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.157.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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