Gene detail

Detailed information of evm.model.Ap9.1845 in Astrangia poculata

Genomic Location: Ap9:20180360...20188308
NR annotation: KAJ7378947.1, Axonemal dynein light intermediate polypeptide 1 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q26630	33 kDa inner dynein arm light chain, axonemal OS=Strongylocentrotus purpuratus OX=7668 PE=1 SV=1
O14645	Axonemal dynein light intermediate polypeptide 1 OS=Homo sapiens OX=9606 GN=DNALI1 PE=1 SV=2
Q4R3K5	Axonemal dynein light intermediate polypeptide 1 OS=Macaca fascicularis OX=9541 GN=DNALI1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005895 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10211 all species →	Ax_dynein_light	Axonemal dynein light chain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019347 all species →	Family	Axonemal dynein light chain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13183 all species →	AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0030175 all species →	Cellular Component	filopodium	Interproscan
GO:0045504 all species →	Molecular Function	dynein heavy chain binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10410	DNALI; dynein axonemal light intermediate chain 1	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.