Detailed information of evm.model.Ap9.210 in Astrangia poculata

Genomic Location: Ap9:2083187...2149075
NR annotation: XP_020617830.1, WD repeat and FYVE domain-containing protein 3-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IZQ1WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens OX=9606 GN=WDFY3 PE=1 SV=2
Q6VNB8WD repeat and FYVE domain-containing protein 3 OS=Mus musculus OX=10090 GN=Wdfy3 PE=1 SV=1
Q6ZS81WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens OX=9606 GN=WDFY4 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002444 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15787
all species →
DUF4704Neurobeachin/BDCP, DUF4704 alpha solenoid regionRepeatInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan
PF01363
all species →
FYVEFYVE zinc fingerDomainInterproscan
PF02138
all species →
BeachBeige/BEACH domainFamilyInterproscan
PF14844
all species →
PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000306
all species →
DomainFYVE zinc fingerInterproscan
IPR031570
all species →
DomainNeurobeachin/BDCP, DUF4704Interproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR000409
all species →
DomainBEACH domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036372
all species →
Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR017455
all species →
DomainZinc finger, FYVE-relatedInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051944
all species →
FamilyBEACH domain-containing proteinInterproscan
IPR023362
all species →
DomainPH-BEACH domainInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46108
all species →
BLUE CHEESEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22262WDFY3, ALFY; WD repeat and FYVE domain-containing protein 3-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP