Genomic Location: Ap9:2187684...2194093
NR annotation: KAJ7361867.1, hypothetical protein OS493_014512 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap9.213 |
| Transcript |
| evm.model.Ap9.213 |
| Protein |
| evm.model.Ap9.213 |
| UniProt accession | Description |
|---|---|
| A0A0C5PHQ7 | Very long chain fatty acid elongase 5 OS=Tachysurus fulvidraco OX=1234273 GN=ELOVL5 PE=2 SV=1 |
| Q9NYP7 | Very long chain fatty acid elongase 5 OS=Homo sapiens OX=9606 GN=ELOVL5 PE=1 SV=1 |
| Q920L7 | Very long chain fatty acid elongase 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002814 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01151 all species → | ELO | GNS1/SUR4 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002076 all species → | Family | ELO family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11157 all species → | FATTY ACID ACYL TRANSFERASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0009922 all species → | Molecular Function | fatty acid elongase activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0019367 all species → | Biological Process | fatty acid elongation, saturated fatty acid | Interproscan |
| GO:0030148 all species → | Biological Process | sphingolipid biosynthetic process | Interproscan |
| GO:0030176 all species → | Cellular Component | obsolete integral component of endoplasmic reticulum membrane | Interproscan |
| GO:0034625 all species → | Biological Process | fatty acid elongation, monounsaturated fatty acid | Interproscan |
| GO:0034626 all species → | Biological Process | fatty acid elongation, polyunsaturated fatty acid | Interproscan |
| GO:0042761 all species → | Biological Process | very long-chain fatty acid biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10244 | ELOVL5; elongation of very long chain fatty acids protein 5 | EC:2.3.1.199 | Lipid biosynthesis proteins | ko01004 | deepkoala |
Transcript abundance of evm.model.Ap9.213 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
