Gene detail

Detailed information of evm.model.Ap9.2324 in Astrangia poculata

Genomic Location: Ap9:25120064...25147418
NR annotation: KAJ7389516.1, Swi SNF matrix associated, actin dependent regulator of chromatin [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap9.2324

atgggacttggaaaaaccctccaagcaataagcattgcatattactacaaagatgtctggccactgttgattgtagcaccatcttccgtcaagttctcttggattgacgagattgagaaatggctacctgaagtagaaccacaccacttgaatttgattagatctggctgtgacattagcaaccttggtaaagccttgattcatattgttggatatggcctgttgagcttagggacctctaaactcttgctggaagctgtggaaagccacaagttcaatattgttatattagatgaatcacattatttaaagaccaaaagtgctgcccgcacacagcatctccataaactttgcaggaaggccaagcatgctattctgctgagtggaacaccatcacttgcaagaccaagggagctgtatttccagcttgatatagtttgcccagggaagtttgactccttcaataaatttgttagacgttactgtgatgctcgggaagtatactatagaggaaaacgtcattttgacacaagtggtgcatcaaaccttaatgaactctactaccttttgaagacacatgttatgatacggcggctcaagaaagaggttttgactcagcttccaccaaagaggagacagaaagtgacttttgacatctctgagtccaccagtaaacacaaacaggacctacaacagacaatgaaagattttaagaaatgctcagccattatcagaggtgatgctgatgatccaagcatcaggtcccccatgcaagaaatgaataaactatcaaccttactgtataagtatactggccttgtaaagattggtcctgttctgaaatacattgaggacttggcccaaggaatggacagcaagtttattgtctttttccgtcatcgtaaagttcgccaggaaatagaaaagaagttagtggccatgaaaatacaatacatctgtatagctggtgatgtttcttctggcataagaggggatttagttcattcatttcaaactgatcccaaagtacgcattgcagctctgtccattgaagcagcttcttttggccttactttaacagcagctcatcatgtggtttttgccgagctacaccacacccctggtgtgattatccaggcagaagacagagctcacaggattgggcagaccttacctgttaatgttcattacttgattgcacgaggcactgtggatgagatactttggtccatgatcaggcgcaagatttatgtgaccagtagcactcttgatggaaagtgtaaagagcttcaggcagaagatggagatgaagaccagagccgacaattgactgcatgtgctgcatggattcaagatcaggaagaagatgctggtgacctagaagattttgttatgaagcagctttcttcgaaaactctcaaaaaggatcagagccaaagagaccttcgatctttttttgttgctacaccaagttcatcacagtcaaactcattggaatgcaagactggaagtcaacgtgagaacagcaccagtaagaaaggtgtggagcagagtttgaccatgaattccaaggagaaaccgatatcagttgtagacagtgacgaagatgaattctcagcttgggatgatttggatgacgacatcctgatttcagaagtgtctgattcgtttgaaacctatgaacagaagacacccgaccaacccagtcaaccgtgtgtagagaatgcacgcaataaagacaatcttgatgctgaaataaagactactgggcatttggtgcaagcaattgaagaggaacattgttcacttaagccaaaaatgttgaagtttaaaaaagtgaaagatggaaagctttccttcaaaggtagcaataactacactaaacttcatcacaaggaaagtaaatgtgtgcatgtaagtcctttgaaattcgtaggaaatgatcctgagtcggaatcacagactatgcgaggctatttagatgaggaaagtgaggctgaagttgtcaaaacagagcagcgaggtgatgttagtgaaaaggctgtttgtagtgatgagaattcaaaccaaaaggaccgtagtttcttagagtccttacaagaagctgacatagaatgtgttgcagttgtttgtaaatcgacatcaagcataacacaaaacagaggcaagatttcagatgacagtgcttgtgaagtaataaaacaagaaacaagtgatgaatttgaagcggtttcaaatgcaaatgaagtaggcatctttggctccccagggagaccctctgacagtgtcacccccacagtattggccgactcgagttgtaagctggaaagtgatcaggaaatgaccttccttgacagttcctctccaggccagagcaactgtttagatgaaagtggcaatcagatggagacagattctgtttgtgaaattagaaattgccgccaaacttgtacccaggaggagaaatgtttaagtgaagagggatggactgacgatagtatgttgaaccagagtggctttgttagtaaaggaaactgtgaccgcggctcaattagcgcactaaacaaggatggccataaaagcgtctcacatgaagttaaatcttctcacattggtgtcaaggaaaacacagatgaaggcaaagagggtcacaggagcaacaatccaggaaatgaaagtgcagagaattgtaatatgcagtcattagaagagaatgcagggagcagtactgttggcaagttctcgaattcagcgaaatgctttttgcagaatgacgcatgcaaagagaccttacctaacgaaattgctgcacgagaggattctgtttgtatggataatgattcgtcggatgatgttcaagttgcaagcatcagaaatacccaggtagtttctccagtatgcactgtcgtggaagaaagtgtgggaagcagcagtggtgagagttctttaacttcagcaaagtccatctcacagaatgatacatgcaaggaaactggacctagcaatactgcttcaggggtagcttctgtttgtatggacgatgattcgtcggatgattttcaggtttcgagcatcagaaattcccagatggctcctccagtatgcactgcacaaaaaccaggcaagggcaaaaaacgaaaggctagtaagaaatcaaagaacaaaactgcaaatcaagaagttaggaatcgtaacaaaggccagaagacacctgttgaatggtcttgtagcgcttgtacttttattaatgatgggcagctattggaatgttcgatctgcttcactccgcgtcttacagacgaggacaattcaagtattgctaacaaggacgatttgggatttgtagtttcaaatcagcaaagtcatgaagatattgaaatggtggaggttgcagatattccggaagtaagggtagactctacaaatatgaattctgctagtgaaaatggtggccaaaattgtatggtggcggagagcaacatgttattagaaggtgccgatggttctggacaactggcaactagtagtgacactgggcagaatgttgaaggcaatgccattcatgaattatggattgactctaaggcagcatcaagagttgcgtcccaggtgacaaagaattccactgtcctcgaggagaaagcatctgtggatgagcctgagattggtcaggctgctgagcctggcttgcctccgtggtcgtgctcagcttgcacgtttttgaacatgtcacaaatgattgaatgctccatttgtttgactccaagaagacggagtcagaggctgagcacaagtaagaagacacatacagtagaaagacaggagcagaattgcgtaaacaagaacaaatcaaataagagaagacgatggggccgagacagggcaaaaaaggacgagaacccattagacatggaagttgacgttgtcagcagtagcgtcagcggcataactgattgtgttcatgacactttagtaccagaccgtgaaggcttgactccagaacaggagttatcccacgatacagatggtcaagaagtacagtcaagtgaagatagttctggcgggaccaagtctaggccacggaaacggctgaaacttgaagaggtcgatgcaggtagtaccatgtccgatgacattggtaatttttcagatgattcaggtagtttgtgtgaaaacggatcgttagcatgttcctcgccagtttcgtcctctacagctcagaaagagtcaacaccttacataccattcgacgacaaagaaataactacttcagaagactgccttctttctgcagatgatgacaaaatggagcccacgacacatcagacacctgagagctttcaaataggcaagaatgactacgaagtgtattgtgatgagcttgacgtttcagctcagttaattgaagcaattgacagcattgaagagcctttagcagtctcctcctcctccactggcgacaataccactggtgaaaattcgttgtcatgcgtccagtctggcagcaaaagggtggaaaatcttgaagaactgaaagctgcagcggaagagatattcatgtctgattgggaagatgacgactcttggtgggaagaggaaagttgctcaggacaaagctcgtttccttccagcaatgaaacaacgtccagcagtccaacagtcacgagtccattgttcacaaagtgctcggatctttattctgttgctgagctaaaaaccaagctgcagtcaactcctcaacaaccaaagacctgcactacaactgttgtgattaataatattcaacagattgaacctgctgcaagtaatcctaacagcaaaatgccactctcgtcgggaaatcagggtaatttgacgcctgaaactgcagcagcaatagaagaagatgagacagatgaagaagaggaggatgttcccgaagcaaagaaattgaagttttgtttgagtctttacacggaacgtgtgtatttgtacaatgaggacgacagaccgctggggataaatttctgcatgtcggatgtgaaaaactgcaacatggatgatttgcccaccattttacatcacgatgagaacttgaggcaggtgaaaagaatgcttgaagtgtggaagaggatgggagaagggaagaagcgaatccttcgcaagtcagcgcttgtgtttgataatcctttggaagcttacgaatgtgcaagaaagggcatgagtagagaatcgagttatgtaagacatccatcgaaggaaactcaaatccaaaatgtcattgacactgcagaagaaattggaggaaaggttcgtgtagttaagaaaccgaagatcgtatcaaacaaaagaaaaagaaccaatcgcagtggggagacaaatagtggtcagttatcatccactcctcccctcacgggcagtgctgcgtctacttacaccacccaggagagtacctcgagcacagcccctaaggaaaagacgtgttaccaggccgtgagagctgacgggataccgttatgtctgttttgcaagggtccagtagattttgtggacaagatgaaatgctcggattgggatgcgaggttttgttcgtatgattgcaaaagggaacatcaggtacgagtcagcggtacagctgcacggagggcgctgtttgaagcagagcgaggtatctgccagctatgtcagctagatgctcacaccttgtaccaaaacatcactgctctgaacatcagagatcggccggcattcttagcacagacaccttactcatcgctcccacagcagacgttgaagaaaatggtcatggatccaaaagaaggaatgttctgggaggcggaccatatcacgcccgtgtctgaggggggaggggagtgtggattagacaactacaggaccctgtgcgtcatgtgccacagaaaggcaaccgaggaattaaacagaaggctaaaacaacgaaaaagtcatcaatatgctgctgggtatgcagacatttcggccttttttcgaccgcttagctaa

Transcript

evm.model.Ap9.2324

ATGGGACTTGGAAAAACCCTCCAAGCAATAAGCATTGCATATTACTACAAAGATGTCTGGCCACTGTTGATTGTAGCACCATCTTCCGTCAAGTTCTCTTGGATTGACGAGATTGAGAAATGGCTACCTGAAGTAGAACCACACCACTTGAATTTGATTAGATCTGGCTGTGACATTAGCAACCTTGGTAAAGCCTTGATTCATATTGTTGGATATGGCCTGTTGAGCTTAGGGACCTCTAAACTCTTGCTGGAAGCTGTGGAAAGCCACAAGTTCAATATTGTTATATTAGATGAATCACATTATTTAAAGACCAAAAGTGCTGCCCGCACACAGCATCTCCATAAACTTTGCAGGAAGGCCAAGCATGCTATTCTGCTGAGTGGAACACCATCACTTGCAAGACCAAGGGAGCTGTATTTCCAGCTTGATATAGTTTGCCCAGGGAAGTTTGACTCCTTCAATAAATTTGTTAGACGTTACTGTGATGCTCGGGAAGTATACTATAGAGGAAAACGTCATTTTGACACAAGTGGTGCATCAAACCTTAATGAACTCTACTACCTTTTGAAGACACATGTTATGATACGGCGGCTCAAGAAAGAGGTTTTGACTCAGCTTCCACCAAAGAGGAGACAGAAAGTGACTTTTGACATCTCTGAGTCCACCAGTAAACACAAACAGGACCTACAACAGACAATGAAAGATTTTAAGAAATGCTCAGCCATTATCAGAGGTGATGCTGATGATCCAAGCATCAGGTCCCCCATGCAAGAAATGAATAAACTATCAACCTTACTGTATAAGTATACTGGCCTTGTAAAGATTGGTCCTGTTCTGAAATACATTGAGGACTTGGCCCAAGGAATGGACAGCAAGTTTATTGTCTTTTTCCGTCATCGTAAAGTTCGCCAGGAAATAGAAAAGAAGTTAGTGGCCATGAAAATACAATACATCTGTATAGCTGGTGATGTTTCTTCTGGCATAAGAGGGGATTTAGTTCATTCATTTCAAACTGATCCCAAAGTACGCATTGCAGCTCTGTCCATTGAAGCAGCTTCTTTTGGCCTTACTTTAACAGCAGCTCATCATGTGGTTTTTGCCGAGCTACACCACACCCCTGGTGTGATTATCCAGGCAGAAGACAGAGCTCACAGGATTGGGCAGACCTTACCTGTTAATGTTCATTACTTGATTGCACGAGGCACTGTGGATGAGATACTTTGGTCCATGATCAGGCGCAAGATTTATGTGACCAGTAGCACTCTTGATGGAAAGTGTAAAGAGCTTCAGGCAGAAGATGGAGATGAAGACCAGAGCCGACAATTGACTGCATGTGCTGCATGGATTCAAGATCAGGAAGAAGATGCTGGTGACCTAGAAGATTTTGTTATGAAGCAGCTTTCTTCGAAAACTCTCAAAAAGGATCAGAGCCAAAGAGACCTTCGATCTTTTTTTGTTGCTACACCAAGTTCATCACAGTCAAACTCATTGGAATGCAAGACTGGAAGTCAACGTGAGAACAGCACCAGTAAGAAAGGTGTGGAGCAGAGTTTGACCATGAATTCCAAGGAGAAACCGATATCAGTTGTAGACAGTGACGAAGATGAATTCTCAGCTTGGGATGATTTGGATGACGACATCCTGATTTCAGAAGTGTCTGATTCGTTTGAAACCTATGAACAGAAGACACCCGACCAACCCAGTCAACCGTGTGTAGAGAATGCACGCAATAAAGACAATCTTGATGCTGAAATAAAGACTACTGGGCATTTGGTGCAAGCAATTGAAGAGGAACATTGTTCACTTAAGCCAAAAATGTTGAAGTTTAAAAAAGTGAAAGATGGAAAGCTTTCCTTCAAAGGTAGCAATAACTACACTAAACTTCATCACAAGGAAAGTAAATGTGTGCATGTAAGTCCTTTGAAATTCGTAGGAAATGATCCTGAGTCGGAATCACAGACTATGCGAGGCTATTTAGATGAGGAAAGTGAGGCTGAAGTTGTCAAAACAGAGCAGCGAGGTGATGTTAGTGAAAAGGCTGTTTGTAGTGATGAGAATTCAAACCAAAAGGACCGTAGTTTCTTAGAGTCCTTACAAGAAGCTGACATAGAATGTGTTGCAGTTGTTTGTAAATCGACATCAAGCATAACACAAAACAGAGGCAAGATTTCAGATGACAGTGCTTGTGAAGTAATAAAACAAGAAACAAGTGATGAATTTGAAGCGGTTTCAAATGCAAATGAAGTAGGCATCTTTGGCTCCCCAGGGAGACCCTCTGACAGTGTCACCCCCACAGTATTGGCCGACTCGAGTTGTAAGCTGGAAAGTGATCAGGAAATGACCTTCCTTGACAGTTCCTCTCCAGGCCAGAGCAACTGTTTAGATGAAAGTGGCAATCAGATGGAGACAGATTCTGTTTGTGAAATTAGAAATTGCCGCCAAACTTGTACCCAGGAGGAGAAATGTTTAAGTGAAGAGGGATGGACTGACGATAGTATGTTGAACCAGAGTGGCTTTGTTAGTAAAGGAAACTGTGACCGCGGCTCAATTAGCGCACTAAACAAGGATGGCCATAAAAGCGTCTCACATGAAGTTAAATCTTCTCACATTGGTGTCAAGGAAAACACAGATGAAGGCAAAGAGGGTCACAGGAGCAACAATCCAGGAAATGAAAGTGCAGAGAATTGTAATATGCAGTCATTAGAAGAGAATGCAGGGAGCAGTACTGTTGGCAAGTTCTCGAATTCAGCGAAATGCTTTTTGCAGAATGACGCATGCAAAGAGACCTTACCTAACGAAATTGCTGCACGAGAGGATTCTGTTTGTATGGATAATGATTCGTCGGATGATGTTCAAGTTGCAAGCATCAGAAATACCCAGGTAGTTTCTCCAGTATGCACTGTCGTGGAAGAAAGTGTGGGAAGCAGCAGTGGTGAGAGTTCTTTAACTTCAGCAAAGTCCATCTCACAGAATGATACATGCAAGGAAACTGGACCTAGCAATACTGCTTCAGGGGTAGCTTCTGTTTGTATGGACGATGATTCGTCGGATGATTTTCAGGTTTCGAGCATCAGAAATTCCCAGATGGCTCCTCCAGTATGCACTGCACAAAAACCAGGCAAGGGCAAAAAACGAAAGGCTAGTAAGAAATCAAAGAACAAAACTGCAAATCAAGAAGTTAGGAATCGTAACAAAGGCCAGAAGACACCTGTTGAATGGTCTTGTAGCGCTTGTACTTTTATTAATGATGGGCAGCTATTGGAATGTTCGATCTGCTTCACTCCGCGTCTTACAGACGAGGACAATTCAAGTATTGCTAACAAGGACGATTTGGGATTTGTAGTTTCAAATCAGCAAAGTCATGAAGATATTGAAATGGTGGAGGTTGCAGATATTCCGGAAGTAAGGGTAGACTCTACAAATATGAATTCTGCTAGTGAAAATGGTGGCCAAAATTGTATGGTGGCGGAGAGCAACATGTTATTAGAAGGTGCCGATGGTTCTGGACAACTGGCAACTAGTAGTGACACTGGGCAGAATGTTGAAGGCAATGCCATTCATGAATTATGGATTGACTCTAAGGCAGCATCAAGAGTTGCGTCCCAGGTGACAAAGAATTCCACTGTCCTCGAGGAGAAAGCATCTGTGGATGAGCCTGAGATTGGTCAGGCTGCTGAGCCTGGCTTGCCTCCGTGGTCGTGCTCAGCTTGCACGTTTTTGAACATGTCACAAATGATTGAATGCTCCATTTGTTTGACTCCAAGAAGACGGAGTCAGAGGCTGAGCACAAGTAAGAAGACACATACAGTAGAAAGACAGGAGCAGAATTGCGTAAACAAGAACAAATCAAATAAGAGAAGACGATGGGGCCGAGACAGGGCAAAAAAGGACGAGAACCCATTAGACATGGAAGTTGACGTTGTCAGCAGTAGCGTCAGCGGCATAACTGATTGTGTTCATGACACTTTAGTACCAGACCGTGAAGGCTTGACTCCAGAACAGGAGTTATCCCACGATACAGATGGTCAAGAAGTACAGTCAAGTGAAGATAGTTCTGGCGGGACCAAGTCTAGGCCACGGAAACGGCTGAAACTTGAAGAGGTCGATGCAGGTAGTACCATGTCCGATGACATTGGTAATTTTTCAGATGATTCAGGTAGTTTGTGTGAAAACGGATCGTTAGCATGTTCCTCGCCAGTTTCGTCCTCTACAGCTCAGAAAGAGTCAACACCTTACATACCATTCGACGACAAAGAAATAACTACTTCAGAAGACTGCCTTCTTTCTGCAGATGATGACAAAATGGAGCCCACGACACATCAGACACCTGAGAGCTTTCAAATAGGCAAGAATGACTACGAAGTGTATTGTGATGAGCTTGACGTTTCAGCTCAGTTAATTGAAGCAATTGACAGCATTGAAGAGCCTTTAGCAGTCTCCTCCTCCTCCACTGGCGACAATACCACTGGTGAAAATTCGTTGTCATGCGTCCAGTCTGGCAGCAAAAGGGTGGAAAATCTTGAAGAACTGAAAGCTGCAGCGGAAGAGATATTCATGTCTGATTGGGAAGATGACGACTCTTGGTGGGAAGAGGAAAGTTGCTCAGGACAAAGCTCGTTTCCTTCCAGCAATGAAACAACGTCCAGCAGTCCAACAGTCACGAGTCCATTGTTCACAAAGTGCTCGGATCTTTATTCTGTTGCTGAGCTAAAAACCAAGCTGCAGTCAACTCCTCAACAACCAAAGACCTGCACTACAACTGTTGTGATTAATAATATTCAACAGATTGAACCTGCTGCAAGTAATCCTAACAGCAAAATGCCACTCTCGTCGGGAAATCAGGGTAATTTGACGCCTGAAACTGCAGCAGCAATAGAAGAAGATGAGACAGATGAAGAAGAGGAGGATGTTCCCGAAGCAAAGAAATTGAAGTTTTGTTTGAGTCTTTACACGGAACGTGTGTATTTGTACAATGAGGACGACAGACCGCTGGGGATAAATTTCTGCATGTCGGATGTGAAAAACTGCAACATGGATGATTTGCCCACCATTTTACATCACGATGAGAACTTGAGGCAGGTGAAAAGAATGCTTGAAGTGTGGAAGAGGATGGGAGAAGGGAAGAAGCGAATCCTTCGCAAGTCAGCGCTTGTGTTTGATAATCCTTTGGAAGCTTACGAATGTGCAAGAAAGGGCATGAGTAGAGAATCGAGTTATGTAAGACATCCATCGAAGGAAACTCAAATCCAAAATGTCATTGACACTGCAGAAGAAATTGGAGGAAAGGTTCGTGTAGTTAAGAAACCGAAGATCGTATCAAACAAAAGAAAAAGAACCAATCGCAGTGGGGAGACAAATAGTGGTCAGTTATCATCCACTCCTCCCCTCACGGGCAGTGCTGCGTCTACTTACACCACCCAGGAGAGTACCTCGAGCACAGCCCCTAAGGAAAAGACGTGTTACCAGGCCGTGAGAGCTGACGGGATACCGTTATGTCTGTTTTGCAAGGGTCCAGTAGATTTTGTGGACAAGATGAAATGCTCGGATTGGGATGCGAGGTTTTGTTCGTATGATTGCAAAAGGGAACATCAGGTACGAGTCAGCGGTACAGCTGCACGGAGGGCGCTGTTTGAAGCAGAGCGAGGTATCTGCCAGCTATGTCAGCTAGATGCTCACACCTTGTACCAAAACATCACTGCTCTGAACATCAGAGATCGGCCGGCATTCTTAGCACAGACACCTTACTCATCGCTCCCACAGCAGACGTTGAAGAAAATGGTCATGGATCCAAAAGAAGGAATGTTCTGGGAGGCGGACCATATCACGCCCGTGTCTGAGGGGGGAGGGGAGTGTGGATTAGACAACTACAGGACCCTGTGCGTCATGTGCCACAGAAAGGCAACCGAGGAATTAAACAGAAGGCTAAAACAACGAAAAAGTCATCAATATGCTGCTGGGTATGCAGACATTTCGGCCTTTTTTCGACCGCTTAGCTAA

Protein

evm.model.Ap9.2324

MGLGKTLQAISIAYYYKDVWPLLIVAPSSVKFSWIDEIEKWLPEVEPHHLNLIRSGCDISNLGKALIHIVGYGLLSLGTSKLLLEAVESHKFNIVILDESHYLKTKSAARTQHLHKLCRKAKHAILLSGTPSLARPRELYFQLDIVCPGKFDSFNKFVRRYCDAREVYYRGKRHFDTSGASNLNELYYLLKTHVMIRRLKKEVLTQLPPKRRQKVTFDISESTSKHKQDLQQTMKDFKKCSAIIRGDADDPSIRSPMQEMNKLSTLLYKYTGLVKIGPVLKYIEDLAQGMDSKFIVFFRHRKVRQEIEKKLVAMKIQYICIAGDVSSGIRGDLVHSFQTDPKVRIAALSIEAASFGLTLTAAHHVVFAELHHTPGVIIQAEDRAHRIGQTLPVNVHYLIARGTVDEILWSMIRRKIYVTSSTLDGKCKELQAEDGDEDQSRQLTACAAWIQDQEEDAGDLEDFVMKQLSSKTLKKDQSQRDLRSFFVATPSSSQSNSLECKTGSQRENSTSKKGVEQSLTMNSKEKPISVVDSDEDEFSAWDDLDDDILISEVSDSFETYEQKTPDQPSQPCVENARNKDNLDAEIKTTGHLVQAIEEEHCSLKPKMLKFKKVKDGKLSFKGSNNYTKLHHKESKCVHVSPLKFVGNDPESESQTMRGYLDEESEAEVVKTEQRGDVSEKAVCSDENSNQKDRSFLESLQEADIECVAVVCKSTSSITQNRGKISDDSACEVIKQETSDEFEAVSNANEVGIFGSPGRPSDSVTPTVLADSSCKLESDQEMTFLDSSSPGQSNCLDESGNQMETDSVCEIRNCRQTCTQEEKCLSEEGWTDDSMLNQSGFVSKGNCDRGSISALNKDGHKSVSHEVKSSHIGVKENTDEGKEGHRSNNPGNESAENCNMQSLEENAGSSTVGKFSNSAKCFLQNDACKETLPNEIAAREDSVCMDNDSSDDVQVASIRNTQVVSPVCTVVEESVGSSSGESSLTSAKSISQNDTCKETGPSNTASGVASVCMDDDSSDDFQVSSIRNSQMAPPVCTAQKPGKGKKRKASKKSKNKTANQEVRNRNKGQKTPVEWSCSACTFINDGQLLECSICFTPRLTDEDNSSIANKDDLGFVVSNQQSHEDIEMVEVADIPEVRVDSTNMNSASENGGQNCMVAESNMLLEGADGSGQLATSSDTGQNVEGNAIHELWIDSKAASRVASQVTKNSTVLEEKASVDEPEIGQAAEPGLPPWSCSACTFLNMSQMIECSICLTPRRRSQRLSTSKKTHTVERQEQNCVNKNKSNKRRRWGRDRAKKDENPLDMEVDVVSSSVSGITDCVHDTLVPDREGLTPEQELSHDTDGQEVQSSEDSSGGTKSRPRKRLKLEEVDAGSTMSDDIGNFSDDSGSLCENGSLACSSPVSSSTAQKESTPYIPFDDKEITTSEDCLLSADDDKMEPTTHQTPESFQIGKNDYEVYCDELDVSAQLIEAIDSIEEPLAVSSSSTGDNTTGENSLSCVQSGSKRVENLEELKAAAEEIFMSDWEDDDSWWEEESCSGQSSFPSSNETTSSSPTVTSPLFTKCSDLYSVAELKTKLQSTPQQPKTCTTTVVINNIQQIEPAASNPNSKMPLSSGNQGNLTPETAAAIEEDETDEEEEDVPEAKKLKFCLSLYTERVYLYNEDDRPLGINFCMSDVKNCNMDDLPTILHHDENLRQVKRMLEVWKRMGEGKKRILRKSALVFDNPLEAYECARKGMSRESSYVRHPSKETQIQNVIDTAEEIGGKVRVVKKPKIVSNKRKRTNRSGETNSGQLSSTPPLTGSAASTYTTQESTSSTAPKEKTCYQAVRADGIPLCLFCKGPVDFVDKMKCSDWDARFCSYDCKREHQVRVSGTAARRALFEAERGICQLCQLDAHTLYQNITALNIRDRPAFLAQTPYSSLPQQTLKKMVMDPKEGMFWEADHITPVSEGGGECGLDNYRTLCVMCHRKATEELNRRLKQRKSHQYAAGYADISAFFRPLS*

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E1BB03	DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 PE=3 SV=3
Q5FWF4	DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3 PE=1 SV=2
Q6NZP1	DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001424 (this species only)
Ubiquitin family	UBD\|ZnF\|NZF · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF01844 all species →	HNH	HNH endonuclease	Family	Interproscan
PF00176 all species →	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049730 all species →	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR001876 all species →	Domain	Zinc finger, RanBP2-type	Interproscan
IPR002711 all species →	Domain	HNH endonuclease	Interproscan
IPR000330 all species →	Domain	SNF2, N-terminal	Interproscan
IPR038718 all species →	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR036443 all species →	Homologous_superfamily	Zinc finger, RanBP2-type superfamily	Interproscan
IPR003615 all species →	Domain	HNH nuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45766 all species →	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004519 all species →	Molecular Function	endonuclease activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140658 all species →	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0031297 all species →	Biological Process	replication fork processing	Interproscan
GO:0048478 all species →	Biological Process	obsolete replication fork protection	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25861	ZRANB3; DNA annealing helicase and endonuclease ZRANB3	EC:5.6.2.- EC:3.1.-.-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap9.2324 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples

0TPM > 0

4Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole organism · cold control	14	0	0.00	0.00
whole organism · heat control	12	0	0.00	0.00
whole organism · cold challenge	12	0	0.00	0.00
whole organism · heat challenge	11	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR10674714	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674715	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674724	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674733	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674734	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674735	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674736	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674737	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674739	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674743	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674746	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674747	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674748	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674750	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674706	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674707	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674708	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674717	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674718	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674720	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674721	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674725	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674731	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674741	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674752	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674753	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674711	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674712	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674713	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674722	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674723	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674730	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674732	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674738	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674740	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674744	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674745	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674749	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674709	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674710	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674716	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674719	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674726	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674727	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674728	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674729	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674742	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674751	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674754	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.