Gene detail

Detailed information of evm.model.Ap9.2356 in Astrangia poculata

Genomic Location: Ap9:25462524...25469320
NR annotation: KAJ7389535.1, hypothetical protein OS493_030920 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46434	Glutathione S-transferase 1 (Fragment) OS=Onchocerca volvulus OX=6282 GN=GST1 PE=1 SV=1
P18426	S-crystallin SL11 OS=Nototodarus sloanii OX=215440 PE=2 SV=1
P27012	S-crystallin 4 OS=Enteroctopus dofleini OX=267067 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000387 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02798 all species →	GST_N	Glutathione S-transferase, N-terminal domain	Domain	Interproscan
PF14497 all species →	GST_C_3	Glutathione S-transferase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR004046 all species →	Domain	Glutathione S-transferase, C-terminal	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR050213 all species →	Family	Glutathione S-transferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11571 all species →	GLUTATHIONE S-TRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004364 all species →	Molecular Function	glutathione transferase activity	Interproscan
GO:0006749 all species →	Biological Process	glutathione metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04097	HPGDS; prostaglandin-H2 D-isomerase / glutathione transferase	EC:5.3.99.2 EC:2.5.1.18	Chemical carcinogenesis - DNA adducts	ko05204	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.