Detailed information of evm.model.Ap9.2487 in Astrangia poculata

Genomic Location: Ap9:26866070...26874847
NR annotation: KAJ7382851.1, Myelin expression factor 2 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C854Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1
Q9P2K5Myelin expression factor 2 OS=Homo sapiens OX=9606 GN=MYEF2 PE=1 SV=3
Q9D0E1Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004977 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR003954
all species →		DomainRNA recognition motif domain, eukaryoteInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR050374
all species →		FamilyRRT5/SRSF/Splicing Factor SRInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23003
all species →		RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:1990904
all species →		Cellular Componentribonucleoprotein complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.2487.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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