Detailed information of evm.model.Ap9.2525 in Astrangia poculata

Genomic Location: Ap9:27310269...27325666
NR annotation: XP_022797978.1, LOW QUALITY PROTEIN: uncharacterized protein LOC111336195 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D2S4K7D-inositol 3-phosphate glycosyltransferase OS=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / CCUG 61914 / KCC A-0152 / KCTC 9177 / NBRC 13315 / NRRL B-3577 / G-20) OX=526225 GN=mshA PE=3 SV=1
Q55E58Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1
D5UJ42D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000163 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20706
all species →		GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF16095
all species →		CORC-terminal of Roc, COR, domainFamilyInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR032171
all species →		DomainC-terminal of Roc (COR) domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050715
all species →		FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752
all species →		LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.2525.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP