Detailed information of evm.model.Ap9.2531 in Astrangia poculata

Genomic Location: Ap9:27426756...27444451
NR annotation: PFX16534.1, Protein NLRC3 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BTC0Death-inducer obliterator 1 OS=Homo sapiens OX=9606 GN=DIDO1 PE=1 SV=5
Q8C9B9Death-inducer obliterator 1 OS=Mus musculus OX=10090 GN=Dido1 PE=1 SV=4
Q5S006Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000163 (this species only)
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16095
all species →
CORC-terminal of Roc, COR, domainFamilyInterproscan
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan
PF07744
all species →
SPOCSPOC domainDomainInterproscan
PF00531
all species →
DeathDeath domainDomainInterproscan
PF02338
all species →
OTUOTU-like cysteine proteaseFamilyInterproscan
PF13176
all species →
TPR_7Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR032171
all species →
DomainC-terminal of Roc (COR) domainInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR000488
all species →
DomainDeath domainInterproscan
IPR003323
all species →
DomainOTU domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR012921
all species →
DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR052699
all species →
FamilyRegulatory & Mitotic Spindle AssociatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098
all species →
RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.2531.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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