Gene detail

Detailed information of evm.model.Ap9.257 in Astrangia poculata

Genomic Location: Ap9:2693076...2709628
NR annotation: CAH3162702.1, unnamed protein product, partial [Porites lobata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap9.257

atgtattttattaaaacagtactggtatctgcagtgctagtgtattctgtcggtgggaaagaaatgaaagaaggaaacagcgacacgagtctccatacagccaaccggaaggacactgccatttcaatgaatgttgagtccgcatggcgagctgggtatacaggcaaaggagttattgtagccgtggtggacgatggcgtcaacatgaatcatgatgacctgaaatcaaacttcaacctagattcaagttatgactttttgaaggaccgaaatataagtcgtcggtatagccctgggagtcatggaacaaattgtgctggaatcattgctggaggagataatactatctgtggcgtgggtatagcgtttggcgcgcaaattgcaagtattcgactgtatgatgacaacaccaaatcaaccgaccagccagaagcaagggcattacgccataaaaggaacttgattgacatttactccaacagctgggggcctggggatatgggttggcaagtggagggaccaggtcctcgattaacaaaggttttggaagaggggacacgattgggtcgccatggcaaaggatccatctttgtcttcgcctcgggaaatggtggaatcacaggcgacagctgtgcgttcagtggttacgtaaacagcattcacaccatcgccatctctgcagtgaactgggacggctcggtaccatccttcactgagcagtgcgcggccatcatggctgtgacctatggacaggatatgttcacatatggacaggtcaaagcccctatgattaccacaaaaggtgttgatggtcagtgcaccgaggacttctcaggtacttccagttctaccgcgttggcttctgggattattgctttggcgcttgaggcgaatccagatctgacgtggcgtgacgtccagcacttgattgctagaagttccaagcctttggctcctcgagttttggccacgagaagttctaggcgccctacaccacactggacagagaacgcagctaatctttcggtgagtagtcattatggatttggactgatggatgctagaaaaatggttggatacgcaaagaattggacttctgtccctgagcaactgtcttgcgaagttcacctcaatgtctcaagttctactgggcaacaaatttcttggaccaaaaacgtgcagctatacctgtttgtaggcaaacacgactgtggcatccgatacttagaacacgtgcaagtacaagtcgatcttacgtttcctcgccgagggtacctggagatgagttcggtatcacccagtggaactcggtccaaacttctttatccacgagtgattgacagcatcaccggcttcaaaaactttaccaactggacagtgactagcttacactactggggagaaaaccccgttggaaactggaagataattatacgaaacacaaagcaaaagagtagaaagatggaagtgacctacgctgagccgtgtggaaatatagacggtgacaaagattgtattttctggaaaagctactgcaaaataagcccgtacctacaacgtaattgtgcgaagacttgtggaaaatgtccagttctaggtcacgtattttctttgaagttgatactgtatggtactagagatgatcctcttacaagcaacagccatgttgacagaagtgagaagaaacttcacagtgggctctcacatctaataagaggacgaatcgacacggctgttgatggctgtcattttgaatttgagatatacctattcatggcggttactcacagtggagttactggtggaggtcttcctgtagcaaattatgcggtggtggagttcagaaacgctctcgtaaatgcaacagtccctctcctgaaaaccgtggaagagactgcagcaagctggggcgagctacacaaacacggaggtgtaacacacataaatgtccagttcacggcggctactcgcagtggtccgtctggtctcagcagtgcagtcggtcttgtgggaaaggaaaccggtatcgttatcgttcatgtaccaatcctcggccagcacacagaggacgagggtgcagcaaactgggaccagctacagaaatacggaaatgtaacacacgccgttgcccagttcatggtggttactcgcagtggtcctcctggtctcagtgtagcaagtcatgtgttggaggaacgcaacatcgtaatcgctcatgcaccaatccaccgcctgcaaatggtggaagggactgcaaccgactggaacgggctacagaatcacggaaatgtaacacatttggatgcccagttcacggcgattactcgcaatggtcctcctggtctcagtgtagccagtcctgtgatggaggaactcaacatcgtaatcgttcatgtaccaatcctaggccggcttacaaaggaagcgggtgtagcagactcggactag

Transcript

evm.model.Ap9.257

ATGTATTTTATTAAAACAGTACTGGTATCTGCAGTGCTAGTGTATTCTGTCGGTGGGAAAGAAATGAAAGAAGGAAACAGCGACACGAGTCTCCATACAGCCAACCGGAAGGACACTGCCATTTCAATGAATGTTGAGTCCGCATGGCGAGCTGGGTATACAGGCAAAGGAGTTATTGTAGCCGTGGTGGACGATGGCGTCAACATGAATCATGATGACCTGAAATCAAACTTCAACCTAGATTCAAGTTATGACTTTTTGAAGGACCGAAATATAAGTCGTCGGTATAGCCCTGGGAGTCATGGAACAAATTGTGCTGGAATCATTGCTGGAGGAGATAATACTATCTGTGGCGTGGGTATAGCGTTTGGCGCGCAAATTGCAAGTATTCGACTGTATGATGACAACACCAAATCAACCGACCAGCCAGAAGCAAGGGCATTACGCCATAAAAGGAACTTGATTGACATTTACTCCAACAGCTGGGGGCCTGGGGATATGGGTTGGCAAGTGGAGGGACCAGGTCCTCGATTAACAAAGGTTTTGGAAGAGGGGACACGATTGGGTCGCCATGGCAAAGGATCCATCTTTGTCTTCGCCTCGGGAAATGGTGGAATCACAGGCGACAGCTGTGCGTTCAGTGGTTACGTAAACAGCATTCACACCATCGCCATCTCTGCAGTGAACTGGGACGGCTCGGTACCATCCTTCACTGAGCAGTGCGCGGCCATCATGGCTGTGACCTATGGACAGGATATGTTCACATATGGACAGGTCAAAGCCCCTATGATTACCACAAAAGGTGTTGATGGTCAGTGCACCGAGGACTTCTCAGGTACTTCCAGTTCTACCGCGTTGGCTTCTGGGATTATTGCTTTGGCGCTTGAGGCGAATCCAGATCTGACGTGGCGTGACGTCCAGCACTTGATTGCTAGAAGTTCCAAGCCTTTGGCTCCTCGAGTTTTGGCCACGAGAAGTTCTAGGCGCCCTACACCACACTGGACAGAGAACGCAGCTAATCTTTCGGTGAGTAGTCATTATGGATTTGGACTGATGGATGCTAGAAAAATGGTTGGATACGCAAAGAATTGGACTTCTGTCCCTGAGCAACTGTCTTGCGAAGTTCACCTCAATGTCTCAAGTTCTACTGGGCAACAAATTTCTTGGACCAAAAACGTGCAGCTATACCTGTTTGTAGGCAAACACGACTGTGGCATCCGATACTTAGAACACGTGCAAGTACAAGTCGATCTTACGTTTCCTCGCCGAGGGTACCTGGAGATGAGTTCGGTATCACCCAGTGGAACTCGGTCCAAACTTCTTTATCCACGAGTGATTGACAGCATCACCGGCTTCAAAAACTTTACCAACTGGACAGTGACTAGCTTACACTACTGGGGAGAAAACCCCGTTGGAAACTGGAAGATAATTATACGAAACACAAAGCAAAAGAGTAGAAAGATGGAAGTGACCTACGCTGAGCCGTGTGGAAATATAGACGGTGACAAAGATTGTATTTTCTGGAAAAGCTACTGCAAAATAAGCCCGTACCTACAACGTAATTGTGCGAAGACTTGTGGAAAATGTCCAGTTCTAGGTCACGTATTTTCTTTGAAGTTGATACTGTATGGTACTAGAGATGATCCTCTTACAAGCAACAGCCATGTTGACAGAAGTGAGAAGAAACTTCACAGTGGGCTCTCACATCTAATAAGAGGACGAATCGACACGGCTGTTGATGGCTGTCATTTTGAATTTGAGATATACCTATTCATGGCGGTTACTCACAGTGGAGTTACTGGTGGAGGTCTTCCTGTAGCAAATTATGCGGTGGTGGAGTTCAGAAACGCTCTCGTAAATGCAACAGTCCCTCTCCTGAAAACCGTGGAAGAGACTGCAGCAAGCTGGGGCGAGCTACACAAACACGGAGGTGTAACACACATAAATGTCCAGTTCACGGCGGCTACTCGCAGTGGTCCGTCTGGTCTCAGCAGTGCAGTCGGTCTTGTGGGAAAGGAAACCGGTATCGTTATCGTTCATGTACCAATCCTCGGCCAGCACACAGAGGACGAGGGTGCAGCAAACTGGGACCAGCTACAGAAATACGGAAATGTAACACACGCCGTTGCCCAGTTCATGGTGGTTACTCGCAGTGGTCCTCCTGGTCTCAGTGTAGCAAGTCATGTGTTGGAGGAACGCAACATCGTAATCGCTCATGCACCAATCCACCGCCTGCAAATGGTGGAAGGGACTGCAACCGACTGGAACGGGCTACAGAATCACGGAAATGTAACACATTTGGATGCCCAGTTCACGGCGATTACTCGCAATGGTCCTCCTGGTCTCAGTGTAGCCAGTCCTGTGATGGAGGAACTCAACATCGTAATCGTTCATGTACCAATCCTAGGCCGGCTTACAAAGGAAGCGGGTGTAGCAGACTCGGACTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P29122	Proprotein convertase subtilisin/kexin type 6 OS=Homo sapiens OX=9606 GN=PCSK6 PE=1 SV=1
Q63415	Proprotein convertase subtilisin/kexin type 6 OS=Rattus norvegicus OX=10116 GN=Pcsk6 PE=1 SV=1
O17798	Furin-like protease kpc-1 OS=Caenorhabditis elegans OX=6239 GN=kpc-1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000147 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01483 all species →	P_proprotein	Proprotein convertase P-domain	Family	Interproscan
PF00082 all species →	Peptidase_S8	Subtilase family	Domain	Interproscan
PF01549 all species →	ShK	ShK domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034182 all species →	Domain	Kexin/furin catalytic domain	Interproscan
IPR003582 all species →	Domain	ShKT domain	Interproscan
IPR002884 all species →	Domain	P domain	Interproscan
IPR015500 all species →	Family	Peptidase S8, subtilisin-related	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR036852 all species →	Homologous_superfamily	Peptidase S8/S53 domain superfamily	Interproscan
IPR023827 all species →	Active_site	Peptidase S8, subtilisin, Asp-active site	Interproscan
IPR000209 all species →	Domain	Peptidase S8/S53 domain	Interproscan
IPR022398 all species →	Active_site	Peptidase S8, subtilisin, His-active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42884 all species →	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016485 all species →	Biological Process	protein processing	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap9.257.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.