Detailed information of evm.model.Ap9.2607 in Astrangia poculata

Genomic Location: Ap9:28070286...28071775
NR annotation: XP_020610600.1, growth/differentiation factor 6-A-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P85857Growth/differentiation factor 6-A OS=Danio rerio OX=7955 GN=gdf6a PE=1 SV=1
A8E7N9Growth/differentiation factor 6-B OS=Danio rerio OX=7955 GN=gdf6b PE=2 SV=1
P30884Bone morphogenetic protein 2-B OS=Xenopus laevis OX=8355 GN=bmp2-b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000495 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00688
all species →		TGFb_propeptideTGF-beta propeptideFamilyInterproscan
PF00019
all species →		TGF_betaTransforming growth factor beta like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017948
all species →		Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR001111
all species →		DomainTGF-beta, propeptideInterproscan
IPR029034
all species →		Homologous_superfamilyCystine-knot cytokineInterproscan
IPR001839
all species →		DomainTransforming growth factor-beta, C-terminalInterproscan
IPR015615
all species →		FamilyTransforming growth factor-beta-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848
all species →		TGF-BETA FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008083
all species →		Molecular Functiongrowth factor activityInterproscan
GO:0005125
all species →		Molecular Functioncytokine activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.2607.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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