Gene detail

Detailed information of evm.model.Ap9.2623 in Astrangia poculata

Genomic Location: Ap9:28209916...28231101
NR annotation: CAH3143966.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap9.2623

atgtctcattcagcacaggctaacggggatttactgcctcggtgtctttccgattcaaggctggatgaagcgtttagcgcacacgggcagagcggccatcgcttcagccgaaaaacatttactcggccaacctactgtcaccactgcacggacatgctttggggtttgacaaatcaaggattgatttgtgaagtttgtaattttgtgagtcatgagcgatgtatgcagcttgtggtgtctccttgcatttctattgcaacatctttagtgaaggaaccagtggcacatagttggagtggtccgtctttctttcggagaagattctgttgtgtttgtaggaaaagacttgatgaacatgtagccttccgatgtcaagtttgtgactactttgctcatgaagaatgtagggagtttagtgttagtgactgtaaaaagtgtgcttcgtatgcgccatacatgcaaaagcaatcagctcgacaagctcatcattggagggaaggaaatttatcaccgagtgcaaagtgtgcgcactgtaaacatacatgtggaagcatggagtgtccagcgagcgtcaaatgcagctggtgtggacagtcagcccacagctcttgtcattatatgttacccaaagaatgtggatttggttatcttcacaagcttgtgttacctccatatgctgtatcaatgccaaacgtcgccttgtggagttcatgttcactgagcagatgtacatctactagtattagtggaactgcagatgacgatgacggaatagtctcagatgaaccactacaaaacggcgacatcagttcttcccccgatccagatgaaacatatttaaaaatttatgatggtgaagtagcagatccaaagctttgtaaaaacgttgcgattcctaggacagctcaagccagcaatgttctagaggaagctctgaagaaatttcatatcacagatgatcctagtaattactaccttgcaagagctgttgatgaagaaaatgaacgtgcacttgatcctgaagaaaaacctcaccaatttacagaaaacaattcatcaaaaccattgatcttcctcagaatgaagagtgctgatagacgaaaaggatatattagagtttaccctggaatgataaacgtgtcttcgacattcaagacaattccagtgacagcagtcacaactgttaaagatgtcattcagattactttagaaaaatttggacttaagggtgcaaatccagaaaactactctttgacagaagtgcacttaaatcagggagttatgaaatcaatgagtaaaacttgcaataaacctacaaaagatatgaatgtcgttcaagaacgaagaatggaatacaatgattgtccatggaaaacattgatggatgtcagaaaaaaatctataaggaaaatgaaactcacaagattctacttacgacaaaacttggagcctctgggcagtgtatgcatatgtgttggaagtcttcctacaggcctggactcaagcaaatacgaaactttgattagtgatattttaggagagactatgcagttttgtgaagtgaaaagtgtatttccaagttacggtatggtgtttgtatttttcccagctgctgatgtagcggctgacgctgtggataaattcaagagctcgactgtggacagcaagcatctgtttgtaagagtcttgccaaacatacaccctgaactgttcccccctaacagtcagccacttctagtgcttgtaaactctaaaagtggaggtggtcagggggccgacatgctggcagctttccagagacttctcaaccctcatcaagtacacagtctgacagaaggaggaccattattagggttttatgctttcaggtcaattcctgattttcgtgttttgatctgtggtggcgacggctctgttggatgggtgttgtcatgtttggatgatgtcgttcaggaaatgaagtgcaagatgcctgcatcagctattctccctctcggcacaggtaacgatctttctcgtgtactccaatggggaggagggtactctggtggggaaagtcctgtctcgctacttatggccgtcgaccaatcacaagaaggtctcctggacagatggtgtgtgatgtttgattcgccagactcgacagtccctgatacgctgtcaaatgacagtgctataggttccattggtggaaaagaagatgatcctagtattttgaccatgaacaattattttggtatcggaattggtgctgagctgtgtctggactttcatctgcagagagaagaagcaccttctaagtttcacagcagactacataacaaaggtgtttattttagagcaggactgaagaaaatggtgagaggttactccaagacatttgtggatgaagttgaaatagagattgatggtaaaaaacttgatttaccagcattggaaggaatcgtaattcttaatataagcagttggggagcaggaactgatgcatggggacctgacaaggaggatggttacgctccagcatgtcattgtgatggccttgttgaagttgttggttttcagggagttatgcacatgggtcaaattcaaagtggaatcagaactggaatacgactagcacagggagcccagatcaacatcaaactgaaatctgagatgcctgtacagattgatggtgaaccttggatgcaggccgctggcaatgtgatcgtgcggccaatactaacacaggccctgatgttaaccaaaaggaaagtcaaagtgaagaacccaagaagaccatcaagttcgtcgcgaccctcgtcacgcgccaacacaaggagtattttttatgaagactga

Transcript

evm.model.Ap9.2623

AAGAAAATGTCTCATTCAGCACAGGCTAACGGGGATTTACTGCCTCGGTGTCTTTCCGATTCAAGGCTGGATGAAGCGTTTAGCGCACACGGGCAGAGCGGCCATCGCTTCAGCCGAAAAACATTTACTCGGCCAACCTACTGTCACCACTGCACGGACATGCTTTGGGGTTTGACAAATCAAGGATTGATTTGTGAAGTTTGTAATTTTGTGAGTCATGAGCGATGTATGCAGCTTGTGGTGTCTCCTTGCATTTCTATTGCAACATCTTTAGTGAAGGAACCAGTGGCACATAGTTGGAGTGGTCCGTCTTTCTTTCGGAGAAGATTCTGTTGTGTTTGTAGGAAAAGACTTGATGAACATGTAGCCTTCCGATGTCAAGTTTGTGACTACTTTGCTCATGAAGAATGTAGGGAGTTTAGTGTTAGTGACTGTAAAAAGTGTGCTTCGTATGCGCCATACATGCAAAAGCAATCAGCTCGACAAGCTCATCATTGGAGGGAAGGAAATTTATCACCGAGTGCAAAGTGTGCGCACTGTAAACATACATGTGGAAGCATGGAGTGTCCAGCGAGCGTCAAATGCAGCTGGTGTGGACAGTCAGCCCACAGCTCTTGTCATTATATGTTACCCAAAGAATGTGGATTTGGTTATCTTCACAAGCTTGTGTTACCTCCATATGCTGTATCAATGCCAAACGTCGCCTTGTGGAGTTCATGTTCACTGAGCAGATGTACATCTACTAGTATTAGTGGAACTGCAGATGACGATGACGGAATAGTCTCAGATGAACCACTACAAAACGGCGACATCAGTTCTTCCCCCGATCCAGATGAAACATATTTAAAAATTTATGATGGTGAAGTAGCAGATCCAAAGCTTTGTAAAAACGTTGCGATTCCTAGGACAGCTCAAGCCAGCAATGTTCTAGAGGAAGCTCTGAAGAAATTTCATATCACAGATGATCCTAGTAATTACTACCTTGCAAGAGCTGTTGATGAAGAAAATGAACGTGCACTTGATCCTGAAGAAAAACCTCACCAATTTACAGAAAACAATTCATCAAAACCATTGATCTTCCTCAGAATGAAGAGTGCTGATAGACGAAAAGGATATATTAGAGTTTACCCTGGAATGATAAACGTGTCTTCGACATTCAAGACAATTCCAGTGACAGCAGTCACAACTGTTAAAGATGTCATTCAGATTACTTTAGAAAAATTTGGACTTAAGGGTGCAAATCCAGAAAACTACTCTTTGACAGAAGTGCACTTAAATCAGGGAGTTATGAAATCAATGAGTAAAACTTGCAATAAACCTACAAAAGATATGAATGTCGTTCAAGAACGAAGAATGGAATACAATGATTGTCCATGGAAAACATTGATGGATGTCAGAAAAAAATCTATAAGGAAAATGAAACTCACAAGATTCTACTTACGACAAAACTTGGAGCCTCTGGGCAGTGTATGCATATGTGTTGGAAGTCTTCCTACAGGCCTGGACTCAAGCAAATACGAAACTTTGATTAGTGATATTTTAGGAGAGACTATGCAGTTTTGTGAAGTGAAAAGTGTATTTCCAAGTTACGGTATGGTGTTTGTATTTTTCCCAGCTGCTGATGTAGCGGCTGACGCTGTGGATAAATTCAAGAGCTCGACTGTGGACAGCAAGCATCTGTTTGTAAGAGTCTTGCCAAACATACACCCTGAACTGTTCCCCCCTAACAGTCAGCCACTTCTAGTGCTTGTAAACTCTAAAAGTGGAGGTGGTCAGGGGGCCGACATGCTGGCAGCTTTCCAGAGACTTCTCAACCCTCATCAAGTACACAGTCTGACAGAAGGAGGACCATTATTAGGGTTTTATGCTTTCAGGTCAATTCCTGATTTTCGTGTTTTGATCTGTGGTGGCGACGGCTCTGTTGGATGGGTGTTGTCATGTTTGGATGATGTCGTTCAGGAAATGAAGTGCAAGATGCCTGCATCAGCTATTCTCCCTCTCGGCACAGGTAACGATCTTTCTCGTGTACTCCAATGGGGAGGAGGGTACTCTGGTGGGGAAAGTCCTGTCTCGCTACTTATGGCCGTCGACCAATCACAAGAAGGTCTCCTGGACAGATGGTGTGTGATGTTTGATTCGCCAGACTCGACAGTCCCTGATACGCTGTCAAATGACAGTGCTATAGGTTCCATTGGTGGAAAAGAAGATGATCCTAGTATTTTGACCATGAACAATTATTTTGGTATCGGAATTGGTGCTGAGCTGTGTCTGGACTTTCATCTGCAGAGAGAAGAAGCACCTTCTAAGTTTCACAGCAGACTACATAACAAAGGTGTTTATTTTAGAGCAGGACTGAAGAAAATGGTGAGAGGTTACTCCAAGACATTTGTGGATGAAGTTGAAATAGAGATTGATGGTAAAAAACTTGATTTACCAGCATTGGAAGGAATCGTAATTCTTAATATAAGCAGTTGGGGAGCAGGAACTGATGCATGGGGACCTGACAAGGAGGATGGTTACGCTCCAGCATGTCATTGTGATGGCCTTGTTGAAGTTGTTGGTTTTCAGGGAGTTATGCACATGGGTCAAATTCAAAGTGGAATCAGAACTGGAATACGACTAGCACAGGGAGCCCAGATCAACATCAAACTGAAATCTGAGATGCCTGTACAGATTGATGGTGAACCTTGGATGCAGGCCGCTGGCAATGTGATCGTGCGGCCAATACTAACACAGGCCCTGATGTTAACCAAAAGGAAAGTCAAAGTGAAGAACCCAAGAAGACCATCAAGTTCGTCGCGACCCTCGTCACGCGCCAACACAAGGAGTATTTTTTATGAAGACTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P5E8	Diacylglycerol kinase theta OS=Mus musculus OX=10090 GN=Dgkq PE=1 SV=1
D3ZEY4	Diacylglycerol kinase theta OS=Rattus norvegicus OX=10116 GN=Dgkq PE=1 SV=1
P52824	Diacylglycerol kinase theta OS=Homo sapiens OX=9606 GN=DGKQ PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003348 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00609 all species →	DAGK_acc	Diacylglycerol kinase accessory domain	Family	Interproscan
PF00781 all species →	DAGK_cat	Diacylglycerol kinase catalytic domain	Family	Interproscan
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000756 all species →	Domain	Diacylglycerol kinase, accessory domain	Interproscan
IPR001206 all species →	Domain	Diacylglycerol kinase, catalytic domain	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR037607 all species →	Family	Diacylglycerol kinase	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR016064 all species →	Homologous_superfamily	NAD kinase/diacylglycerol kinase-like domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR017438 all species →	Homologous_superfamily	Inorganic polyphosphate/ATP-NAD kinase, N-terminal	Interproscan
IPR020454 all species →	Domain	Diacylglycerol/phorbol-ester binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11255 all species →	DIACYLGLYCEROL KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004143 all species →	Molecular Function	ATP-dependent diacylglycerol kinase activity	Interproscan
GO:0007205 all species →	Biological Process	obsolete protein kinase C-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00901	dgkA, DGK; diacylglycerol kinase (ATP)	EC:2.7.1.107	Choline metabolism in cancer	ko05231	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.