Genomic Location: Ap9:28992691...28994071
NR annotation: XP_020610547.1, protein Mpv17-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap9.2682 |
| Transcript |
| evm.model.Ap9.2682 |
| Protein |
| evm.model.Ap9.2682 |
| UniProt accession | Description |
|---|---|
| Q5TZ51 | Mitochondrial inner membrane protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1 |
| Q6CIY7 | Protein SYM1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=SYM1 PE=3 SV=1 |
| Q60SZ2 | Mitochondrial inner membrane protein Mpv17 (Fragment) OS=Caenorhabditis briggsae OX=6238 GN=CBG20693 PE=3 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001094 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04117 all species → | Mpv17_PMP22 | Mpv17 / PMP22 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007248 all species → | Family | Mpv17/PMP22 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11266 all species → | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0034614 all species → | Biological Process | cellular response to reactive oxygen species | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K13348 | MPV17; protein Mpv17 | - | Peroxisome | ko04146 | deepkoala |
Transcript abundance of evm.model.Ap9.2682 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
