Detailed information of evm.model.Ap9.2688 in Astrangia poculata

Genomic Location: Ap9:29033127...29042010
NR annotation: KAJ7370080.1, hypothetical protein OS493_034289 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6R5N8Toll-like receptor 13 OS=Mus musculus OX=10090 GN=Tlr13 PE=1 SV=1
Q6QNU9Toll-like receptor 12 OS=Mus musculus OX=10090 GN=Tlr12 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000113 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00047
all species →		igImmunoglobulin domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF13676
all species →		TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR015621
all species →		FamilyInterleukin-1 receptor familyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11890
all species →		INTERLEUKIN-1 RECEPTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.2688.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP