Detailed information of evm.model.Ap9.409 in Astrangia poculata

Genomic Location: Ap9:4543557...4554828
NR annotation: XP_022805927.1, stimulated by retinoic acid gene 6 protein-like [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000326 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14752
all species →		RBP_receptorRetinol binding protein receptorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026612
all species →		FamilyReceptor for retinol uptake STRA6-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21444
all species →		COILED-COIL DOMAIN-CONTAINING PROTEIN 180Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0071939
all species →		Biological Processvitamin A import into cellInterproscan
GO:0034632
all species →		Molecular Functionretinol transmembrane transporter activityInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23088STRA6; vitamin A receptor/transporter (stra6) family protein-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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