Detailed information of evm.model.Ap9.469 in Astrangia poculata

Genomic Location: Ap9:5122059...5125220
NR annotation: MCG7868633.1, GIY-YIG nuclease family protein [Candidatus Thiodiazotropha taylori]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000041 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01541
all species →		GIY-YIGGIY-YIG catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR000305
all species →		DomainGIY-YIG endonucleaseInterproscan
IPR035901
all species →		Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301
all species →		REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap9.469. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.469.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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