Detailed information of evm.model.Ap9.535 in Astrangia poculata

Genomic Location: Ap9:5779877...5795095
NR annotation: XP_027059572.1, uncharacterized protein LOC113686175 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZU0Gametocyte-specific factor 1 OS=Bos taurus OX=9913 GN=GTSF1 PE=2 SV=1
Q8WW33Gametocyte-specific factor 1 OS=Homo sapiens OX=9606 GN=GTSF1 PE=1 SV=2
Q4R8M9Gametocyte-specific factor 1 OS=Macaca fascicularis OX=9541 GN=GTSF1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05253
all species →		zf-U11-48KU11-48K-like CHHC zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR022776
all species →		DomainTRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainInterproscan
IPR051591
all species →		FamilyUPF0224 (FAM112) RNA ProcessingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21402
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap9.535. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.535.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP