Detailed information of evm.model.Ap9.893 in Astrangia poculata

Genomic Location: Ap9:9770306...9781549
NR annotation: XP_020621079.1, uncharacterized protein LOC110058761 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25291Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
P27590Uromodulin OS=Rattus norvegicus OX=10116 GN=Umod PE=2 SV=1
Q28343Aggrecan core protein OS=Canis lupus familiaris OX=9615 GN=ACAN PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000073 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan
PF09458
all species →		H_lectinH-type lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan
IPR037221
all species →		Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR019019
all species →		DomainH-type lectin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039
all species →		FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.893.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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