Gene detail

Detailed information of evm.model.Ap9.90 in Astrangia poculata

Genomic Location: Ap9:768062...777463
NR annotation: XP_020619255.1, kelch-like protein 12 isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap9.90

atgatcgtttgcccaaaatcccctaaaccgggagcaggctgggacccagacaaccttttaggctccagtcctatcaggtatatcccggctatcatggcggattcaccggcaaatttgtttccaaggcttgttttgttcggagattccctaactcaagaatcttttagtgagggaggttggggagcagcgatagcagatcactatcagaggaaatgtgacgttcttagtcgaggattcagtggttacactacagcatttaacaagctgattcttcccaaaatcctccagtgcgacaatagtcccaaaggtagcattgtagcagcggttgtcttgctcggttctaatgactctgttttggaagacgtagatccacgcggaatcactgttgaacaatacattgcgaacttaactgacatcttaaaacaattcatgaataatggaatagcagcaaatcaacttgtccttctaacaccaccagcaatatccgaagttatagctacaaaaaaatttgctgaaaatggctggacaatgtctttatcagatgagaaagtgaaatgctttgctgggagatgtgctgatttaggaaagtcccttggagtagatgttgttgatctttacacattattccgtcaacagccgcaagcctttcttcagtgcgacagcgacatgaaagagtctcaagaaggagttgttcgcctggagatgttttccagtctgtatggaaaaacactgagttttacaccgtataaattgggccaatgcgaagaacttgtttccaacatccaaaaattcatccttgcaaatttcagcgccgtctacgcagccaaccgaatggaggttttaaatatgtcgagcagagaaattgaaatgtttatttcaagtgatgaaataaatgtaagcgcggaggaagatgtttttaatatcattttatcatggattgatcatgacaaaagcaagcgaaagaaacattttgccgagttatttcgtcacgttcgcctggtttatgtatcgcgtgactttctgtgcagtgctgtcgtgacaaacaatctcgtgaaagacagtgaaggctgtttggatcttgtagaggacgcgctgaaaatgattgagtctaaagacttcagtaatctatctgttacacctagaaagtcgcttgagacgtctgttataatcatcgaaacagatacccaatatgagttcggagatattctgtgttatttccctcgcgaagatatgtggcgtattttaggcaggagtggaaatacagaggatatacttcctcgccgagaacattcctgttcaacaagaaaaagagagtttgtttcttgtcgtggtaaactttatgaattcctggagtcgtggaattcgtctccagtacactggaatgaacgccatctggcaaggtataatccattctcaaataaatggttgtcattgccatatactggtgacaaatacggatatttgcggcaaatatttgttacaaatgaagatgagatgtacgccttggtatctgagccatgtatgtaccatggcttaagtttgctggtgaaaaagagagagttctgtggcaaagaaaaacatgtttccttcatcataaagtacaaacccgaatcaaactcatgggaagacattacatcatttgatcatttgaatagataccatgtttgcattgtagccaatgataattttgtttattttattggaggtgtaaaatatgagcatgatgtcgctcgcaaagccacggctgaagttgacagatacgaccttagaaaagaccagtggagcaaagtagctgacattcatgaggggtgtatgtttcatcggggagctgcagtgaacgaaaacattttcattgctggttttcttaaaagtgatatatggttgaaccaatgtcaagtgtacaatgaaacaacaaatgagtggcagatcattgcaagcccgagtggcactgaactcttggctgttgatggcaagctgtttgctgtgggctatccaattacgtatccgccccaacgttttattgtaatagttgaatgttatgaccctatcaaggataaatggacgctgaaaaataaaacagcttcccggactgtgacaggttttacaaattcatgtctaatgagaatttacaaagaattccctgccggccatcaactggaaagcttcaatcctcggccttctatgacgcgatctttcatctgctacttccaagtcttcgtcccttctgcggtcccagggtacaaggatgtctccgtctatgagaccttccaccgaccttgcaggaagagagtcaatgaccaagctccaaaaactcttctgtgtactgaactctgtactgaacaagatgtcggtaaatcattgttcaccggaccaataaggaactgggaatcatttctgagtgatggtcttcatttgtctaaagaagggaaccattttgtggcaagtcaagtgattccaatattggagaccaagctggcacacttacctcagatattccctgactggaaggatattgatcctcaacatccagagaaattttgctgctatcatggagcatgttaa

Transcript

evm.model.Ap9.90

ATGATCGTTTGCCCAAAATCCCCTAAACCGGGAGCAGGCTGGGACCCAGACAACCTTTTAGGCTCCAGTCCTATCAGGTATATCCCGGCTATCATGGCGGATTCACCGGCAAATTTGTTTCCAAGGCTTGTTTTGTTCGGAGATTCCCTAACTCAAGAATCTTTTAGTGAGGGAGGTTGGGGAGCAGCGATAGCAGATCACTATCAGAGGAAATGTGACGTTCTTAGTCGAGGATTCAGTGGTTACACTACAGCATTTAACAAGCTGATTCTTCCCAAAATCCTCCAGTGCGACAATAGTCCCAAAGGTAGCATTGTAGCAGCGGTTGTCTTGCTCGGTTCTAATGACTCTGTTTTGGAAGACGTAGATCCACGCGGAATCACTGTTGAACAATACATTGCGAACTTAACTGACATCTTAAAACAATTCATGAATAATGGAATAGCAGCAAATCAACTTGTCCTTCTAACACCACCAGCAATATCCGAAGTTATAGCTACAAAAAAATTTGCTGAAAATGGCTGGACAATGTCTTTATCAGATGAGAAAGTGAAATGCTTTGCTGGGAGATGTGCTGATTTAGGAAAGTCCCTTGGAGTAGATGTTGTTGATCTTTACACATTATTCCGTCAACAGCCGCAAGCCTTTCTTCAGTGCGACAGCGACATGAAAGAGTCTCAAGAAGGAGTTGTTCGCCTGGAGATGTTTTCCAGTCTGTATGGAAAAACACTGAGTTTTACACCGTATAAATTGGGCCAATGCGAAGAACTTGTTTCCAACATCCAAAAATTCATCCTTGCAAATTTCAGCGCCGTCTACGCAGCCAACCGAATGGAGGTTTTAAATATGTCGAGCAGAGAAATTGAAATGTTTATTTCAAGTGATGAAATAAATGTAAGCGCGGAGGAAGATGTTTTTAATATCATTTTATCATGGATTGATCATGACAAAAGCAAGCGAAAGAAACATTTTGCCGAGTTATTTCGTCACGTTCGCCTGGTTTATGTATCGCGTGACTTTCTGTGCAGTGCTGTCGTGACAAACAATCTCGTGAAAGACAGTGAAGGCTGTTTGGATCTTGTAGAGGACGCGCTGAAAATGATTGAGTCTAAAGACTTCAGTAATCTATCTGTTACACCTAGAAAGTCGCTTGAGACGTCTGTTATAATCATCGAAACAGATACCCAATATGAGTTCGGAGATATTCTGTGTTATTTCCCTCGCGAAGATATGTGGCGTATTTTAGGCAGGAGTGGAAATACAGAGGATATACTTCCTCGCCGAGAACATTCCTGTTCAACAAGAAAAAGAGAGTTTGTTTCTTGTCGTGGTAAACTTTATGAATTCCTGGAGTCGTGGAATTCGTCTCCAGTACACTGGAATGAACGCCATCTGGCAAGGTATAATCCATTCTCAAATAAATGGTTGTCATTGCCATATACTGGTGACAAATACGGATATTTGCGGCAAATATTTGTTACAAATGAAGATGAGATGTACGCCTTGGTATCTGAGCCATGTATGTACCATGGCTTAAGTTTGCTGGTGAAAAAGAGAGAGTTCTGTGGCAAAGAAAAACATGTTTCCTTCATCATAAAGTACAAACCCGAATCAAACTCATGGGAAGACATTACATCATTTGATCATTTGAATAGATACCATGTTTGCATTGTAGCCAATGATAATTTTGTTTATTTTATTGGAGGTGTAAAATATGAGCATGATGTCGCTCGCAAAGCCACGGCTGAAGTTGACAGATACGACCTTAGAAAAGACCAGTGGAGCAAAGTAGCTGACATTCATGAGGGGTGTATGTTTCATCGGGGAGCTGCAGTGAACGAAAACATTTTCATTGCTGGTTTTCTTAAAAGTGATATATGGTTGAACCAATGTCAAGTGTACAATGAAACAACAAATGAGTGGCAGATCATTGCAAGCCCGAGTGGCACTGAACTCTTGGCTGTTGATGGCAAGCTGTTTGCTGTGGGCTATCCAATTACGTATCCGCCCCAACGTTTTATTGTAATAGTTGAATGTTATGACCCTATCAAGGATAAATGGACGCTGAAAAATAAAACAGCTTCCCGGACTGTGACAGGTTTTACAAATTCATGTCTAATGAGAATTTACAAAGAATTCCCTGCCGGCCATCAACTGGAAAGCTTCAATCCTCGGCCTTCTATGACGCGATCTTTCATCTGCTACTTCCAAGTCTTCGTCCCTTCTGCGGTCCCAGGGTACAAGGATGTCTCCGTCTATGAGACCTTCCACCGACCTTGCAGGAAGAGAGTCAATGACCAAGCTCCAAAAACTCTTCTGTGTACTGAACTCTGTACTGAACAAGATGTCGGTAAATCATTGTTCACCGGACCAATAAGGAACTGGGAATCATTTCTGAGTGATGGTCTTCATTTGTCTAAAGAAGGGAACCATTTTGTGGCAAGTCAAGTGATTCCAATATTGGAGACCAAGCTGGCACACTTACCTCAGATATTCCCTGACTGGAAGGATATTGATCCTCAACATCCAGAGAAATTTTGCTGCTATCATGGAGCATGTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DB29	Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus OX=10090 GN=Iah1 PE=1 SV=1
Q3SZ16	Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Bos taurus OX=9913 GN=IAH1 PE=2 SV=1
Q711G3	Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006141 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF13472 all species →	Lipase_GDSL_2	GDSL-like Lipase/Acylhydrolase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR036514 all species →	Homologous_superfamily	SGNH hydrolase superfamily	Interproscan
IPR013830 all species →	Domain	SGNH hydrolase-type esterase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24412 all species →	KELCH PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap9.90.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.