Detailed information of evm.model.HiC_scaffold_1.3 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:29187...40224
NR annotation: XP_047137342.1, cell wall protein PRY3 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q568B7tRNA-queuosine alpha-mannosyltransferase OS=Danio rerio OX=7955 GN=gtdc1 PE=2 SV=2
Q4V7R4tRNA-queuosine alpha-mannosyltransferase OS=Xenopus laevis OX=8355 GN=gtdc1 PE=2 SV=1
Q66K99tRNA-queuosine alpha-mannosyltransferase OS=Xenopus tropicalis OX=8364 GN=gtdc1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000148 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00534
all species →		Glycos_transf_1Glycosyl transferases group 1FamilyInterproscan
PF12038
all species →		DUF3524Domain of unknown function (DUF3524)FamilyInterproscan
PF00188
all species →		CAPCysteine-rich secretory protein familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034113
all species →		DomainGolgi-associated plant pathogenesis-related protein 1, SCP domainInterproscan
IPR014044
all species →		DomainCAP domainInterproscan
IPR051862
all species →		FamilyGlycosyltransferase-like domain-containing protein 1Interproscan
IPR001283
all species →		FamilyCysteine-rich secretory protein-relatedInterproscan
IPR001296
all species →		DomainGlycosyl transferase, family 1Interproscan
IPR035940
all species →		Homologous_superfamilyCAP superfamilyInterproscan
IPR002413
all species →		FamilyVenom allergen 5-likeInterproscan
IPR018244
all species →		Conserved_siteAllergen V5/Tpx-1-related, conserved siteInterproscan
IPR022701
all species →		DomaintRNA-queuosine alpha-mannosyltransferase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13615
all species →		GLYCOSYLTRANSFERASE-LIKE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016757
all species →		Molecular Functionglycosyltransferase activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_1.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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