Gene detail

Detailed information of evm.model.HiC_scaffold_10.341 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:4015077...4022198
NR annotation: XP_028405011.1, 26S proteasome non-ATPase regulatory subunit 14 [Dendronephthya gigantea]
Species abbreviation CQUIN · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00487	26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens OX=9606 GN=PSMD14 PE=1 SV=1
O35593	26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus OX=10090 GN=Psmd14 PE=1 SV=2
Q9V3H2	26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster OX=7227 GN=Rpn11 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007195 (this species only)
Ubiquitin family	UBD\|Other\|Jab_MPN · all ubiquitin genes in this species
Ubiquitin family	DUB\|JAMM\|JAMM · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01398 all species →	JAB	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037518 all species →	Domain	MPN domain	Interproscan
IPR050242 all species →	Family	JAMM/MPN+ metalloenzymes, peptidase M67A	Interproscan
IPR000555 all species →	Domain	JAB1/MPN/MOV34 metalloenzyme domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10410 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0008541 all species →	Cellular Component	proteasome regulatory particle, lid subcomplex	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0070628 all species →	Molecular Function	proteasome binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03030	PSMD14, RPN11, POH1; 26S proteasome regulatory subunit N11	-	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.