Detailed information of evm.model.HiC_scaffold_10.545 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:6510285...6519846
NR annotation: XP_002158689.3, cysteine protease atg4da isoform X1 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96DT6Cysteine protease ATG4C OS=Homo sapiens OX=9606 GN=ATG4C PE=1 SV=1
Q811C2Cysteine protease ATG4C OS=Mus musculus OX=10090 GN=Atg4c PE=2 SV=2
Q68FJ9Cysteine protease ATG4D OS=Xenopus laevis OX=8355 GN=atg4d PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001754 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03416
all species →		Peptidase_C54Peptidase family C54FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046792
all species →		DomainPeptidase C54, catalytic domainInterproscan
IPR005078
all species →		FamilyPeptidase C54Interproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22624
all species →		CYSTEINE PROTEASE ATG4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0019786
all species →		Molecular Functionprotein-phosphatidylethanolamide deconjugating activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08342ATG4; cysteine protease ATG4EC:3.4.22.-
Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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