Gene detail

Detailed information of evm.model.HiC_scaffold_10.548 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:6585888...6590313
NR annotation: PIK51706.1, putative mimitin, mitochondrial [Apostichopus japonicus]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0MQ86	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA12 PE=2 SV=1
Q9UI09	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Homo sapiens OX=9606 GN=NDUFA12 PE=1 SV=1
Q0MQ87	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pan troglodytes OX=9598 GN=NDUFA12 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009421 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05071 all species →	NDUFA12	NADH ubiquinone oxidoreductase subunit NDUFA12	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052618 all species →	Family	Complex I NDUFA12 subunit	Interproscan
IPR007763 all species →	Family	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32470 all species →	ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0032981 all species →	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18160	NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.