Gene detail

Detailed information of evm.model.HiC_scaffold_10.552 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:6639540...6646442
NR annotation: XP_002742313.1, PREDICTED: tribbles homolog 2-like [Saccoglossus kowalevskii]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96RU8	Tribbles homolog 1 OS=Homo sapiens OX=9606 GN=TRIB1 PE=1 SV=2
Q8K4K4	Tribbles homolog 1 OS=Mus musculus OX=10090 GN=Trib1 PE=2 SV=2
Q8K4K3	Tribbles homolog 2 OS=Mus musculus OX=10090 GN=Trib2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008317 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR024104 all species →	Family	Pseudokinase tribbles family/serine-threonine-protein kinase 40	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22961 all species →	SER/THR PROTEIN KINASE-TRB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031434 all species →	Molecular Function	mitogen-activated protein kinase kinase binding	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0043405 all species →	Biological Process	regulation of MAP kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_10.552.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.