Detailed information of evm.model.HiC_scaffold_103.3 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_103:24492...26365
NR annotation: XP_002739190.1, PREDICTED: uncharacterized protein LOC100369835 [Saccoglossus kowalevskii]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000096 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01693
all species →		Cauli_VICaulimovirus viroplasminFamilyInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037056
all species →		Homologous_superfamilyRibonuclease H1, N-terminal domain superfamilyInterproscan
IPR052055
all species →		FamilyHepadnavirus polymerase/reverse transcriptaseInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011320
all species →		DomainRibonuclease H1, N-terminalInterproscan
IPR009027
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL9/RNase H1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33050
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_103.3. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_103.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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