Detailed information of evm.model.HiC_scaffold_12.78 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_12:748846...757510
NR annotation: CAH3138992.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y2M0Fanconi-associated nuclease 1 OS=Homo sapiens OX=9606 GN=FAN1 PE=1 SV=4
Q69ZT1Fanconi-associated nuclease 1 OS=Mus musculus OX=10090 GN=Fan1 PE=2 SV=2
D2HNY3Fanconi-associated nuclease 1 OS=Ailuropoda melanoleuca OX=9646 GN=FAN1 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005089 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21170
all species →		FAN1_TPRFanconi-associated nuclease 1, TPR domainDomainInterproscan
PF21315
all species →		FAN1_HTHFAN1, HTH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006642
all species →		DomainRad18, zinc finger UBZ4-typeInterproscan
IPR049126
all species →		DomainFanconi-associated nuclease 1-like, TPR domainInterproscan
IPR049125
all species →		DomainFanconi-associated nuclease 1-like, winged-helix domainInterproscan
IPR033315
all species →		FamilyFanconi-associated nuclease 1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15749
all species →		FANCONI-ASSOCIATED NUCLEASE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0008409
all species →		Molecular Function5'-3' exonuclease activityInterproscan
GO:0017108
all species →		Molecular Function5'-flap endonuclease activityInterproscan
GO:0036297
all species →		Biological Processinterstrand cross-link repairInterproscan
GO:0070336
all species →		Molecular Functionflap-structured DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_12.78.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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