Detailed information of evm.model.HiC_scaffold_1259.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1259:6198...7556
NR annotation: XP_022110923.1, regulator of microtubule dynamics protein 1-like isoform X2 [Acanthaster planci]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4G069Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1
Q9DCV4Regulator of microtubule dynamics protein 1 OS=Mus musculus OX=10090 GN=Rmdn1 PE=1 SV=2
Q5R8E4Regulator of microtubule dynamics protein 1 OS=Pongo abelii OX=9601 GN=RMDN1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001299 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21033
all species →		RMD1-3Regulator of microtubule dynamics protein 1-3RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049039
all species →		RepeatRegulator of microtubule dynamics protein 1-3, alpha helical repeatsInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16056
all species →		REGULATOR OF MICROTUBULE DYNAMICS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005876
all species →		Cellular Componentspindle microtubuleInterproscan
GO:0008017
all species →		Molecular Functionmicrotubule bindingInterproscan
GO:0097431
all species →		Cellular Componentmitotic spindle poleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_1259.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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