Detailed information of evm.model.HiC_scaffold_131.9 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_131:193677...199358
NR annotation: EDO40477.1, predicted protein [Nematostella vectensis]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DE26RuvB-like 1 OS=Xenopus laevis OX=8355 GN=ruvbl1 PE=2 SV=1
P60122RuvB-like 1 OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1
P60123RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001951 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17856
all species →		TIP49_CTIP49 AAA-lid domainDomainInterproscan
PF06068
all species →		TIP49TIP49 P-loop domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027238
all species →		FamilyRuvB-likeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041048
all species →		DomainRuvB-like, AAA-lid domainInterproscan
IPR010339
all species →		DomainTIP49, P-loop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11093
all species →		RUVB-RELATED REPTIN AND PONTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000492
all species →		Biological Processbox C/D snoRNP assemblyInterproscan
GO:0000812
all species →		Cellular ComponentSwr1 complexInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008094
all species →		Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0016573
all species →		Biological Processobsolete histone acetylationInterproscan
GO:0031011
all species →		Cellular ComponentIno80 complexInterproscan
GO:0035267
all species →		Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0097255
all species →		Cellular ComponentR2TP complexInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_131.9.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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