Detailed information of evm.model.HiC_scaffold_149.38 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_149:443252...451787
NR annotation: XP_020613437.1, ran-binding protein 9-like isoform X2 [Orbicella faveolata]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L252Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1
P69566Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1
Q96S59Ran-binding protein 9 OS=Homo sapiens OX=9606 GN=RANBP9 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006439 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08513
all species →		LisHLisHDomainInterproscan
PF10607
all species →		CTLHCTLH/CRA C-terminal to LisH motif domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR024964
all species →		DomainCTLH/CRA C-terminal to LisH motif domainInterproscan
IPR006595
all species →		DomainCTLH, C-terminal LisH motifInterproscan
IPR013144
all species →		DomainCRA domainInterproscan
IPR030482
all species →		Familyp53 and DNA damage-regulated protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21162
all species →		P53 AND DNA DAMAGE-REGULATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_149.38.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP