Detailed information of evm.model.HiC_scaffold_149.46 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_149:504793...506365
NR annotation: KAF7461779.1, exonuclease 1 [Marmota monax]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UQ84Exonuclease 1 OS=Homo sapiens OX=9606 GN=EXO1 PE=1 SV=2
Q9QZ11Exonuclease 1 OS=Mus musculus OX=10090 GN=Exo1 PE=2 SV=2
A7AX58Flap endonuclease 1 OS=Babesia bovis OX=5865 GN=FEN1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000453 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00752
all species →		XPG_NXPG N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006084
all species →		FamilyXPG/Rad2 endonucleaseInterproscan
IPR006085
all species →		DomainXPG, N-terminalInterproscan
IPR029060
all species →		Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR019974
all species →		Conserved_siteXPG conserved siteInterproscan
IPR036279
all species →		Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11081
all species →		FLAP ENDONUCLEASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0017108
all species →		Molecular Function5'-flap endonuclease activityInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0016788
all species →		Molecular Functionhydrolase activity, acting on ester bondsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_149.46.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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