Detailed information of evm.model.HiC_scaffold_15.8 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_15:56854...84668
NR annotation: KAJ8048301.1, hypothetical protein HOLleu_00555 [Holothuria leucospilota]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000242 (this species only)
Transcription factor familyHTH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05225
all species →		HTH_psqhelix-turn-helix, Psq domainDomainInterproscan
PF08357
all species →		SEFIRSEFIR domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan
IPR007889
all species →		DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR039465
all species →		FamilyInterleukin-17 receptor-likeInterproscan
IPR013568
all species →		DomainSEFIR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15583
all species →		INTERLEUKIN-17 RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0030368
all species →		Molecular Functioninterleukin-17 receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_15.8.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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