Detailed information of evm.model.HiC_scaffold_1552.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1552:1676...5095
NR annotation: XP_001625765.2, rho guanine nucleotide exchange factor 12 isoform X17 [Nematostella vectensis]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ES67Rho guanine nucleotide exchange factor 11 OS=Rattus norvegicus OX=10116 GN=Arhgef11 PE=1 SV=1
O15085Rho guanine nucleotide exchange factor 11 OS=Homo sapiens OX=9606 GN=ARHGEF11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001658 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09128
all species →
RGS-likeRegulator of G protein signalling-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015212
all species →
DomainRegulator of G protein signalling-like domainInterproscan
IPR044926
all species →
Homologous_superfamilyRGS, subdomain 2Interproscan
IPR036305
all species →
Homologous_superfamilyRGS domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45872
all species →
RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0001664
all species →
Molecular FunctionG protein-coupled receptor bindingInterproscan
GO:0007186
all species →
Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_1552.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP