Detailed information of evm.model.HiC_scaffold_157.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_157:5013...6676
NR annotation: XP_011678644.2, ATP-dependent DNA helicase PIF1-like [Strongylocentrotus purpuratus]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZV90ATP-dependent DNA helicase PIF1 OS=Danio rerio OX=7955 GN=pif1 PE=2 SV=1
Q9H611ATP-dependent DNA helicase PIF1 OS=Homo sapiens OX=9606 GN=PIF1 PE=1 SV=2
Q80SX8ATP-dependent DNA helicase PIF1 OS=Mus musculus OX=10090 GN=Pif1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000529 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05970
all species →		PIF1PIF1-like helicaseFamilyInterproscan
PF21530
all species →		Pif1_2B_domDNA helicase Pif1, 2B domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010285
all species →		FamilyDNA helicase Pif1-likeInterproscan
IPR049163
all species →		DomainDNA helicase Pif1-like, 2B domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23274
all species →		DNA HELICASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0005657
all species →		Cellular Componentreplication forkInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0032508
all species →		Biological ProcessDNA duplex unwindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_157.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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