Detailed information of evm.model.HiC_scaffold_162.3 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_162:67803...74119
NR annotation: RMX54661.1, hypothetical protein pdam_00009339 [Pocillopora damicornis]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P23098Dynein beta chain, ciliary OS=Tripneustes gratilla OX=7673 PE=1 SV=1
P39057Dynein beta chain, ciliary OS=Heliocidaris crassispina OX=1043166 PE=1 SV=1
Q9UFH2Dynein axonemal heavy chain 17 OS=Homo sapiens OX=9606 GN=DNAH17 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000142 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08393
all species →		DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026983
all species →		FamilyDynein heavy chainInterproscan
IPR013602
all species →		DomainDynein heavy chain, linkerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10676
all species →		DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005930
all species →		Cellular ComponentaxonemeInterproscan
GO:0007018
all species →		Biological Processmicrotubule-based movementInterproscan
GO:0008569
all species →		Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286
all species →		Cellular Componentdynein complexInterproscan
GO:0045505
all species →		Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959
all species →		Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060294
all species →		Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729
all species →		Cellular Component9+2 motile ciliumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_162.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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