Detailed information of evm.model.HiC_scaffold_167.13 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_167:116439...124826
NR annotation: XP_047138675.1, general transcription factor IIH subunit 2 [Hydra vulgaris]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2TBV5General transcription factor IIH subunit 2 OS=Bos taurus OX=9913 GN=GTF2H2 PE=2 SV=1
Q6P1K8General transcription factor IIH subunit 2-like protein OS=Homo sapiens OX=9606 GN=GTF2H2C PE=1 SV=1
Q13888General transcription factor IIH subunit 2 OS=Homo sapiens OX=9606 GN=GTF2H2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006027 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04056
all species →		Ssl1Ssl1-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR007198
all species →		DomainSsl1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12695
all species →		GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005675
all species →		Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_167.13.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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