Detailed information of evm.model.HiC_scaffold_17.305 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:4093266...4120593
NR annotation: XP_047140266.1, MAU2 chromatid cohesion factor homolog [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0WYS3MAU2 chromatid cohesion factor homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ012302 PE=3 SV=1
Q16NZ8MAU2 chromatid cohesion factor homolog OS=Aedes aegypti OX=7159 GN=AAEL011819 PE=3 SV=1
B4M4L4MAU2 chromatid cohesion factor homolog OS=Drosophila virilis OX=7244 GN=GJ10962 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005483 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10345
all species →		Cohesin_loadCohesin loading factorRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019440
all species →		FamilyChromatid cohesion factor MAU2Interproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21394
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000785
all species →		Cellular ComponentchromatinInterproscan
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0007064
all species →		Biological Processmitotic sister chromatid cohesionInterproscan
GO:0032116
all species →		Cellular ComponentSMC loading complexInterproscan
GO:0034088
all species →		Biological Processmaintenance of mitotic sister chromatid cohesionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_17.305.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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