Detailed information of evm.model.HiC_scaffold_17.60 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:707517...719289
NR annotation: KAJ3612107.1, hypothetical protein NHX12_020384 [Muraenolepis orangiensis]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3UV71Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2
Q8IUR5Protein O-mannosyl-transferase TMTC1 OS=Homo sapiens OX=9606 GN=TMTC1 PE=1 SV=3
Q6ZXV5Protein O-mannosyl-transferase TMTC3 OS=Homo sapiens OX=9606 GN=TMTC3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000850 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF08409
all species →		TMTC_DUF1736Protein O-mannosyl-transferase TMTC, DUF1736FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013618
all species →		DomainProtein O-mannosyl-transferase TMTC, DUF1736Interproscan
IPR052943
all species →		FamilyTMTC O-mannosyl-transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44809
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_17.60.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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