Detailed information of evm.model.HiC_scaffold_17.97 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:1103796...1110559
NR annotation: CAH1264194.1, BCKDHA [Branchiostoma lanceolatum]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8HXY42-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis OX=9541 GN=BCKDHA PE=2 SV=1
P126942-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=BCKDHA PE=1 SV=2
A5A6H92-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes OX=9598 GN=BCKDHA PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003055 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00676
all species →		E1_dhDehydrogenase E1 componentFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050771
all species →		FamilyAlpha-ketoacid dehydrogenase complex E1 componentInterproscan
IPR001017
all species →		DomainDehydrogenase, E1 componentInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43380
all species →		2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005947
all species →		Cellular Componentobsolete mitochondrial alpha-ketoglutarate dehydrogenase complexInterproscan
GO:0009083
all species →		Biological Processbranched-chain amino acid catabolic processInterproscan
GO:0016624
all species →		Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00166BCKDHA, bkdA1; 2-oxoisovalerate dehydrogenase E1 component subunit alphaEC:1.2.4.4
Lipoic acid metabolismko00785deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP