Detailed information of evm.model.HiC_scaffold_174.8 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_174:84838...97365
NR annotation: XP_033747573.1, C-factor-like isoform X1 [Pecten maximus]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P21158C-signal OS=Myxococcus xanthus OX=34 GN=csgA PE=1 SV=1
Q9RBP51-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase OS=Rhodococcus sp. (strain AD45) OX=103808 GN=isoH PE=1 SV=1
Q8MI29Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis OX=9541 GN=CBR1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001804 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR051468
all species →		FamilyFungal Secondary Metabolite SDRsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43544
all species →		SHORT-CHAIN DEHYDROGENASE/REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_174.8.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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