Gene detail

Detailed information of evm.model.HiC_scaffold_18.166 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_18:1895918...1898176
NR annotation: XP_031567812.1, transcriptional coactivator YAP1-like [Actinia tenebrosa]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46936	Transcriptional coactivator YAP1 OS=Gallus gallus OX=9031 GN=YAP1 PE=1 SV=1
D6C652	Transcriptional coactivator YAP1-A OS=Xenopus laevis OX=8355 GN=yap1-a PE=1 SV=1
A0A8I3PQN6	WW domain-containing transcription regulator protein 1 OS=Canis lupus familiaris OX=9615 GN=WWTR1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008756 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397 all species →	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR051583 all species →	Family	Yes-associated protein 1	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17616 all species →	YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035329 all species →	Biological Process	hippo signaling	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16687	YAP1, Yki; transcriptional coactivator YAP1	-	Hippo signaling pathway - multiple species	ko04392	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.