Detailed information of evm.model.HiC_scaffold_195.11 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_195:104774...105990
NR annotation: XP_044166009.1, LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like [Acropora millepora]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000182 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01498
all species →		HTH_Tnp_Tc3_2TransposaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002492
all species →		DomainTransposase, Tc1-likeInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.HiC_scaffold_195.11. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006313
all species →		Biological ProcessDNA transpositionInterproscan
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_195.11.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP