Detailed information of evm.model.HiC_scaffold_2.116 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:1745386...1747111
NR annotation: XP_046851885.1, LOW QUALITY PROTEIN: uncharacterized protein LOC124445223 [Xenia sp. Carnegie-2017]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009535 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02536
all species →		mTERFmTERFFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038538
all species →		Homologous_superfamilyMTERF superfamily, mitochondrial/chloroplasticInterproscan
IPR003690
all species →		FamilyTranscription termination factor, mitochondrial/chloroplasticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13068
all species →		CGI-12 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15031MTERF; mitochondrial transcription termination factor family protein-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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