Detailed information of evm.model.HiC_scaffold_2.159 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:2103432...2104582
NR annotation: XP_031555730.1, superoxide dismutase [Mn], mitochondrial-like [Actinia tenebrosa]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P28766Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Apostichopus californicus OX=2032702 PE=2 SV=1
P28761Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae OX=7739 PE=2 SV=1
P28767Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Petromyzon marinus OX=7757 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001942 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02777
all species →		Sod_Fe_CIron/manganese superoxide dismutases, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050265
all species →		FamilyIron/Manganese Superoxide DismutaseInterproscan
IPR019832
all species →		DomainManganese/iron superoxide dismutase, C-terminalInterproscan
IPR036314
all species →		Homologous_superfamilyManganese/iron superoxide dismutase, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11404
all species →		SUPEROXIDE DISMUTASE 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0004784
all species →		Molecular Functionsuperoxide dismutase activityInterproscan
GO:0006801
all species →		Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_2.159.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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