Genomic Location: HiC_scaffold_2:2120714...2131497
NR annotation: XP_001629655.3, uncharacterized protein LOC5509135 isoform X1 [Nematostella vectensis]
Species Chrysaora quinquecirrha · all data for this species · gene families
| CDS |
| evm.model.HiC_scaffold_2.160 |
| Transcript |
| evm.model.HiC_scaffold_2.160 |
| Protein |
| evm.model.HiC_scaffold_2.160 |
| UniProt accession | Description |
|---|---|
| P97471 | Mothers against decapentaplegic homolog 4 OS=Mus musculus OX=10090 GN=Smad4 PE=1 SV=2 |
| Q13485 | Mothers against decapentaplegic homolog 4 OS=Homo sapiens OX=9606 GN=SMAD4 PE=1 SV=1 |
| Q9GKQ9 | Mothers against decapentaplegic homolog 4 OS=Sus scrofa OX=9823 GN=SMAD4 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004893 (this species only) |
| Transcription factor family | MH1 · all TF in this species |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03165 all species → | MH1 | MH1 domain | Domain | Interproscan |
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013790 all species → | Family | Dwarfin | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019786 all species → | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR003619 all species → | Domain | MAD homology 1, Dwarfin-type | Interproscan |
| IPR013019 all species → | Domain | MAD homology, MH1 | Interproscan |
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR036578 all species → | Homologous_superfamily | SMAD MH1 domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13703 all species → | SMAD | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0007179 all species → | Biological Process | transforming growth factor beta receptor signaling pathway | Interproscan |
| GO:0009653 all species → | Biological Process | anatomical structure morphogenesis | Interproscan |
| GO:0030154 all species → | Biological Process | cell differentiation | Interproscan |
| GO:0030509 all species → | Biological Process | BMP signaling pathway | Interproscan |
| GO:0060395 all species → | Biological Process | SMAD protein signal transduction | Interproscan |
| GO:0070411 all species → | Molecular Function | I-SMAD binding | Interproscan |
| GO:0071144 all species → | Cellular Component | heteromeric SMAD protein complex | Interproscan |
| GO:0005667 all species → | Cellular Component | transcription regulator complex | Interproscan |
evm.model.HiC_scaffold_2.160.
