Detailed information of evm.model.HiC_scaffold_2.165 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:2184768...2207424
NR annotation: XP_002154870.1, beta-secretase 2 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2HJ40Beta-secretase 1 OS=Bos taurus OX=9913 GN=BACE1 PE=2 SV=1
P56819Beta-secretase 1 OS=Rattus norvegicus OX=10116 GN=Bace1 PE=2 SV=1
P56817Beta-secretase 1 OS=Homo sapiens OX=9606 GN=BACE1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004151 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00026
all species →		AspEukaryotic aspartyl proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001969
all species →		Active_siteAspartic peptidase, active siteInterproscan
IPR001461
all species →		FamilyAspartic peptidase A1 familyInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR033121
all species →		DomainPeptidase family A1 domainInterproscan
IPR021109
all species →		Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21698
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004190
all species →		Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_2.165.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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