Detailed information of evm.model.HiC_scaffold_2.198 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:2787138...2810201
NR annotation: XP_047136017.1, beta-lactamase-like protein 4 isoform X4 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8MY62Putative beta-lactamase-like 1 OS=Homo sapiens OX=9606 GN=LACTBL1 PE=1 SV=2
O75665Centriole and centriolar satellite protein OFD1 OS=Homo sapiens OX=9606 GN=OFD1 PE=1 SV=1
Q80Z25Centriole and centriolar satellite protein OFD1 OS=Mus musculus OX=10090 GN=Ofd1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000640 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00144
all species →		Beta-lactamaseBeta-lactamaseDomainInterproscan
PF16045
all species →		LisH_2LisHDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012338
all species →		Homologous_superfamilyBeta-lactamase/transpeptidase-likeInterproscan
IPR001466
all species →		DomainBeta-lactamase-relatedInterproscan
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR051478
all species →		FamilyBeta-lactamase-like Antibiotic Biosynthesis/ResistanceInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22935
all species →		PENICILLIN-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_2.198.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP