Gene detail

Detailed information of evm.model.HiC_scaffold_2.392 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:4838177...4842972
NR annotation: CAH1774196.1, unnamed protein product [Owenia fusiformis]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B9X187	Nuclear envelope integral membrane protein 1a OS=Xenopus laevis OX=8355 GN=nemp1a PE=1 SV=1
Q28EH9	Nuclear envelope integral membrane protein 1 OS=Xenopus tropicalis OX=8364 GN=nemp1 PE=2 SV=1
A1L3G9	Nuclear envelope integral membrane protein 1b OS=Xenopus laevis OX=8355 GN=nemp1b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003856 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10225 all species →	NEMP	NEMP family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019358 all species →	Family	NEMP family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13598 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27355	NEMP, TMEM194; nuclear envelope integral membrane protein	-	Structural proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.