Detailed information of evm.model.HiC_scaffold_2.473 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:5762351...5778279
NR annotation: XP_012554205.2, polypeptide N-acetylgalactosaminyltransferase 13 [Hydra vulgaris]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95ZJ1Polypeptide N-acetylgalactosaminyltransferase 5 OS=Caenorhabditis elegans OX=6239 GN=gly-5 PE=2 SV=2
Q6WV17Polypeptide N-acetylgalactosaminyltransferase 5 OS=Drosophila melanogaster OX=7227 GN=Pgant5 PE=1 SV=2
O08912Polypeptide N-acetylgalactosaminyltransferase 1 OS=Mus musculus OX=10090 GN=Galnt1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000328 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18804
all species →		CxC3CxC3 like cysteine cluster associated with KDZ transposasesDomainInterproscan
PF18758
all species →		KDZKyakuja-Dileera-Zisupton transposaseFamilyInterproscan
PF00535
all species →		Glycos_transf_2Glycosyl transferase family 2FamilyInterproscan
PF00652
all species →		Ricin_B_lectinRicin-type beta-trefoil lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035992
all species →		Homologous_superfamilyRicin B-like lectinsInterproscan
IPR000772
all species →		DomainRicin B, lectin domainInterproscan
IPR040564
all species →		DomainCxC3 like cysteine clusterInterproscan
IPR040521
all species →		FamilyKyakuja-Dileera-Zisupton transposaseInterproscan
IPR029044
all species →		Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR001173
all species →		DomainGlycosyltransferase 2-likeInterproscan
IPR045885
all species →		DomainN-acetylgalactosaminyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11675
all species →		N-ACETYLGALACTOSAMINYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004653
all species →		Molecular Functionpolypeptide N-acetylgalactosaminyltransferase activityInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006493
all species →		Biological Processprotein O-linked glycosylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_2.473.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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