Detailed information of evm.model.HiC_scaffold_2.527 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:6269767...6281661
NR annotation: KAH7692575.1, Cyclophilin-type peptidyl-prolyl cis-trans isomerase protein [Dioscorea alata]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8TCB7tRNA N(3)-cytidine methyltransferase METTL6 OS=Homo sapiens OX=9606 GN=METTL6 PE=1 SV=2
Q5RDV8tRNA N(3)-cytidine methyltransferase METTL6 OS=Pongo abelii OX=9601 GN=METTL6 PE=2 SV=1
Q8BVH9tRNA N(3)-cytidine methyltransferase METTL6 OS=Mus musculus OX=10090 GN=Mettl6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001564 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08242
all species →		Methyltransf_12Methyltransferase domainDomainInterproscan
PF00001
all species →		7tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00160
all species →		Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029000
all species →		Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR013217
all species →		DomainMethyltransferase type 12Interproscan
IPR000276
all species →		FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR002130
all species →		DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR020892
all species →		Conserved_siteCyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved siteInterproscan
IPR017452
all species →		DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11071
all species →		PEPTIDYL-PROLYL CIS-TRANS ISOMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →		Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →		Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0000413
all species →		Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755
all species →		Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0006457
all species →		Biological Processprotein foldingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_2.527.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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