Detailed information of evm.model.HiC_scaffold_2.53 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:826218...961996
NR annotation: KXJ11332.1, Transposable element P transposase [Exaiptasia diaphana]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000051 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05485
all species →		THAPTHAP domainDomainInterproscan
PF21788
all species →		TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF21787
all species →		TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006612
all species →		DomainTHAP-type zinc fingerInterproscan
IPR048366
all species →		DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR048365
all species →		DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47577
all species →		THAP DOMAIN-CONTAINING PROTEIN 6Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_2.53. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_2.53.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP